Oncorhynchus tshawytscha (Chinook salmon): 112266478
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Entry
112266478 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112266478
04082 Neuroactive ligand signaling
112266478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112266478
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112266478
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
112266478
NCBI-ProteinID:
XP_024299739
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Position
LG14:8590852..8621315
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AA seq
471 aa
AA seq
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MMALSTDIEDKMPSFSTMKHVWISVLLVCITCHVGRGQTTAEALKEAEANDNITIFTRIL
DGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKG
PMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAEC
PMQLEDFPMDAHACPLKFGSYAYPVSEVVYLWQTGAAKSVVVAEDGSRLNQYHLIGQTAG
SEDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFG
VTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDG
KKAMEAQHPKKRDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTSIQLRSSETEVL
DPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILAPT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctctctacagacatagaggacaaaatgcccagcttttctacaatgaaacac
gtgtggatctctgtcttgctggtgtgtattacatgtcacgtgggtcgtggccagaccaca
gcagaggcattgaaagaggcagaggctaatgacaacatcaccatcttcacgcggatactg
gacggactgctggacggctacgacaacagactcagaccaggacttggagaaaaggtcacg
gagatcaaaaccaatatatttgtcacaagctttggcccagtttcagatactgaaatggag
tacaccatcgatgtgtttttccgacaaagctggaaagacgagcgcctgtgtttcaaagga
cccatggagatgctgcctctgaacaacctcctggccagtaacatctggaccccagacaca
ttcttcctcaatgggaaaaagtctatcgcccacaacatgaccacgcctaacaagctactg
agactgaaggatgacggaacgctgctctacaccatgaggttaaccatatcggcggagtgt
cccatgcagttggaggacttcccaatggatgctcatgcttgccctttgaagtttggaagc
tatgcctatccagtctctgaggtggtgtacctctggcaaaccggtgctgccaagtctgta
gtggtggcagaagacggatcccgtctcaaccagtaccacctgatcggccagaccgcaggc
tctgaggacatctacaccagtcgaggacagtacacagtcatgatgtgtcacttctacctg
aagaggaagattggttactttgtcattcagacctacatgccctgcttcatgaccgtgatc
ctgtcccaggtgtccttctggctcaaccgtgaatctgtaccagccaggaccgtctttggt
gtcactacagtgctgactatgactactctcagtatcagcgctcgcaactcgctgcctaag
gtggcctacgccacagccatggattggttcatcgctgtgtgctatgcgttcgtcttctcc
gcacttatcgagtttgccaccgtcaactatttcactaagaggagctgggcgtgggatggc
aaaaaggccatggaggctcagcacccaaagaaaagggaccctatggtgctttctaagaag
cccaacaacgtctgtacagcaggagtgaactacacccccaacatcactaaggatatctct
atctccaccatctccaacagcacctccatacaactaagatcgtctgaaacagaagtcctg
gaccccaagaaaacctacaacagcgtgagcaaaatcgacaaaatgtcccggatagttttc
cctgttctatttggaacctttaacctagtgtactgggctacttacctcaacagagaaccg
gtcatcaaaggagtcaacatattggctccaacatag
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