Oncorhynchus tshawytscha (Chinook salmon): 112266479
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Entry
112266479 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-3-like isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112266479
04082 Neuroactive ligand signaling
112266479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112266479
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112266479
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112266479
NCBI-ProteinID:
XP_042152918
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Position
LG14:8622969..8664889
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AA seq
462 aa
AA seq
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MTTKLLVSFLLLSVQRVRSDPDPRDYDGDYEDTTVSQMLAPKNHQAEATLILNNLLKDYD
KTLRPDIGVKPTLIDVDIYVNSIGPVSSIDMEYEIDIIFAQTWIDSRLQYNSTMKILTLN
SNMVGMIWVPDTIFRNSKNADSHWITMPNQLLRIWNDGKILYTLRLTINAECQLQLHNFP
MDEHSCPLVFSSYGYPKDEMIYRWKRNSIETSDQKYWRLYQFDFMGLRNSTDVLKTTAGD
YVVMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINSDAAPARTALGITTVLTMTTL
STVARTSLPRVSYVTAMDLFVTVCFLFVFAAMMEYAIQNYYAYRAQKPRYNKTNKTQRLE
MAFLCPLPQTYSMLDTGPRSPTTVVPLNNNYSYWQDYEDVYECLDGKDCQSFFCCYEECK
GGGWRKGRIHVDIKELDAYSRVFFPTSFLLFNIVYWVSYLYL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaagttgctggtgtctttcttacttctgtcagtccaacgggtgcgttccgac
ccagacccaagggactacgatggggactatgaggacactactgtcagtcagatgctggct
cccaaaaaccaccaggcagaggccacgctcatattaaataacttactgaaggactacgac
aagacactacgccctgatattggagttaaaccaacgcttatcgacgttgacatatacgtc
aatagcatcggacctgtatcatcaatagacatggaatacgaaattgacatcatttttgca
cagacgtggatcgacagccgtctgcaatacaacagcactatgaagatcctgactctcaac
agcaacatggtgggaatgatctgggtccctgacaccatcttcagaaactccaagaacgca
gactctcattggattacgatgcccaatcagcttctgcgtatttggaacgatgggaagata
ttatacacgctgaggttgaccatcaatgcagagtgccagctgcagctccacaacttccct
atggatgagcactcctgtcccctggtcttctctagctatggttaccccaaggatgaaatg
atttacagatggaaaaggaactccatcgaaacctcagaccagaagtactggcgcctctac
cagtttgacttcatgggcctgcggaattccacagacgtcctaaaaacaacagcaggtgat
tatgtggtcatgacagtgtactttgacctgagcaggagaatgggttatttcaccatccag
acctacatcccctgtatcctcaccgtggtgctctcctgggtctccttctggatcaatagc
gatgccgcccccgccagaacagcactaggtatcaccactgtgttgacaatgaccaccctt
agtacagtggccaggacgtccctacccagagtctcctatgtgacggccatggatctcttt
gtcactgtgtgcttcttgttcgtctttgcggccatgatggagtacgccatccaaaactac
tacgcctacagggcacagaagccccgctacaacaagacaaacaagacgcagagactggag
atggccttcctctgtcccctcccacagacctactcgatgctagacacggggcccaggtcc
cccacgactgtggttccattgaacaacaactactcatactggcaggactatgaggacgtg
tacgagtgtctggacgggaaggactgccagagcttcttctgctgttacgaggagtgcaag
gggggagggtggaggaaaggacgcatccatgttgacattaaggagctggacgcttactcg
agagtcttcttccctacgtcgttcctcctgttcaacatcgtctactgggtctcttatctc
tacctttag
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