Oncorhynchus tshawytscha (Chinook salmon): 112266505
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Entry
112266505 CDS
T05605
Name
(RefSeq) lymphocyte antigen 75-like
KO
K06559
lymphocyte antigen 75
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112266505
04090 CD molecules [BR:
otw04090
]
112266505
04091 Lectins [BR:
otw04091
]
112266505
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
112266505
CD molecules [BR:
otw04090
]
Proteins
112266505
Lectins [BR:
otw04091
]
C-Type lectins
Others
112266505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
CysR_MRC2_N
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
112266505
NCBI-ProteinID:
XP_042152940
LinkDB
All DBs
Position
LG14:complement(9833391..9872234)
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AA seq
1768 aa
AA seq
DB search
MTLQATFYLCFFLFFCDKTICFVTCASTTYSGNDTFTIQHVSTGKCLVATSTSGTGISGI
AGAKSGGSGFNVTLGECDGSRESQWKWGSGHRLFHVGTSQCLGLEEKTKALSLFSCSPME
NTMLLWRCLDGAVYTVDQMGLTVTDGLVSAKRDSSDAWRRDESTDNICQRPMRIVHTTNG
TSTGEPCEFPFHYNGSWYHECLPDDQSPGLYWCSTTSDFDADKKMGYCLKHEEGCKALFD
GPEEGPCYEFVSQVAVTWQEALDSCRSQGADLLSVSSSEDQAFPILDVAHNSRPDRMWIG
LHQLDSSQGWQWSDGSPLNDVRWDNGMPHTSILRESDCGFMNSKNYYESEVCDKKLPYIC
KKNVNVTQSVATEPLEYKSTICDKGWAPWNMFCYKLVMDEPKMFAQAENYCKTIGGGLVS
LHSLDSMEMISTQFHAGTPHTQRNQSRDVLGVWIGLNGTGNPAILSWVDETPVSFTYWDR
NHPIQPSGHSYCVYYFGESHGWRVGSCTQELPFMCQKKGEVNESSTTGCPPEGDWRRHGN
SCYKVDSKEVSFRDRCDLTINNRFEQAFINRLLAEEINVKRQYFWTGLQDIKTSGEYQWV
TQDGSGTNITYTNWGVFEPALAGGCAVMSTAKPLGNWVVKNCTMFKAGSICKRDIAAPQP
LEPEPDPNLPCPDGWTSRPGISYCYKVFHEERLSRKRSWEEAERFCEALGAHLPSFNHPQ
EMKALHYVMRDSISDDRFFWVGLNRRNPAASSWEWSDNRPVSMAIFPQEFHEDDEYNRGC
AAFKTLKGTLKSFFVFLMHEFPPLPFYATPFHCDVRLEWVCQIPAGKTPENPEWYNPGGH
HETSIFIDGNEFWFVTEPKLPYEEASLYCNSNGSKLAAPQSSNAAIQIHNNLPQMSAGKQ
SWWVDVRDTGHYFPIRLPLMQNYRATFLGRCTTISDKNIFPEYEYSCELRLPFVCERHNT
TAIETHSGEPHPNGLPCESGYLLFRDKCYVVITPLYVTFQHANEHCQSMRGTLLTITDQV
EQDFVTSLLPAQPRKTWIGLKLKQQDPEWVDDSPVSYLNFNPLLHGLRRPILINFHDPES
MELCVFMFNDPSSAMMGSWDYTPCSDQQHVAICQHYADKPEEPQFQLEPFQVNNHTFKLL
QKNMTWHEALAECRNQNMDLASVADTLQQSVLTVHVTRARSPMWIGLFSADVGVHYRWTD
HSHTVFSRWSSEPTVGHCVFLDTDGFWKATECMEQLAGAICHVPHEENVTTHEDNAVNCP
HKSSGPNWIPFKNNCYTFQLASSRWEEFDKGQILQTCKKLAPDADILTIRNVVENVFVKE
QLLPFKDLVQFVWLGVFNDDNDNQMKWYDGTNVQYSNWVDGRPSFSASDEFMAGLNTDGV
WKIFTNKHHFSSFKQRSIVACKLDKDSKDQYNQSARDFERYGNLSYHVITRKLSWFQALE
ECGRGNGHLASVHGTRHNAHIELIAKRDGFPLWIGLSSQDASGSQSYEWSDGTKYHYSQA
GLSDTVVTSSSDPQSVCVYITPHGTWMRMDCNAKLDGAICYNTTVTTPTQRSNLAAPQVA
NNCPQNSGSQNSGSKWVEHQDHCYAFDMTFYNYSVYSMEDAKSICERLDAQLLTIMTKEE
NDFVSGYMADNPLITSRVWLGMDLDKQGQPVGWVDGSSLAFSNWETNGSASGVKTATQQN
PCAVMVSADGGIWSRVSCKDSHSRIVCKVPTRSGSAPVVLVFFLVVLTSLLAAIGFVVYK
KSRARFNSTVRYRRTIDDADSTSIMDAE
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgacactccaagcaacattttacctatgttttttcttattcttttgtgataaaactatt
tgttttgtaacttgcgcatcaactacatattccggtaacgacaccttcactatacagcat
gtgagcacagggaagtgcctggtagctacgtccacgtctgggactggaatttccgggata
gcaggggctaagtctggagggtccgggttcaacgtgaccctgggggagtgtgacggctcc
agggagtcccagtggaagtgggggtccggccaccgtctcttccacgtgggcacgtcccag
tgcttgggtctggaggagaagaccaaggccctgtctctgttcagctgtagccccatggag
aacaccatgctgttgtggcgctgcctggacggggccgtctatacggtagaccagatgggc
ctcacggtgaccgacgggctggtcagtgccaagcgcgactcctcagatgcctggaggagg
gatgagtcgaccgataatatctgccagcggccgatgcgcattgtccacaccaccaatggg
acgtcgaccggggagccctgtgagtttcccttccactacaacggcagctggtaccacgag
tgcctccccgacgaccaatcacctggactatactggtgttccacaacctccgactttgac
gctgacaaaaagatgggatattgtctaaaacatgaggaaggctgcaaggccctgttcgat
ggccctgaggagggaccctgttatgagtttgtgtcccaggtcgcggtgacatggcaggaa
gcgctggactcttgtcgcagccagggagctgacctgctcagcgtctccagctcagaggac
caagccttccccatcttggacgtggcccataacagcaggccagacaggatgtggatcggc
ctacaccagctggactcgtctcagggctggcaatggtcagacggctcacccctcaacgac
gtgcgctgggacaacgggatgccacacacatcgatccttagggagtcagactgtggattc
atgaattcgaaaaactactacgagagtgaggtctgcgataaaaaacttccctacatctgt
aagaaaaacgtcaacgtcacccagtcggtagcaacagagcctttggagtataaatccacc
atatgtgacaagggctgggccccttggaacatgttctgttacaagctggtgatggatgaa
ccaaagatgtttgctcaggccgaaaattactgtaagaccatcggaggaggcctggtcagt
ctacacagcctggacagcatggagatgatcagcactcagttccatgcaggtacaccgcac
actcagagaaaccaatcacgagatgtgttgggcgtgtggatcggtctgaacgggacgggg
aacccagccatccttagctgggttgacgagacacctgtctccttcacctactgggacagg
aatcatcctatccaaccctcaggacactcttactgtgtctactactttggagagtctcat
ggctggagggttgggagctgtacccaggagctgcctttcatgtgtcagaagaaaggagag
gtgaacgagtcttctacgacaggatgccctcctgaaggggactggaggagacatgggaac
tcgtgctacaaagtggactctaaagaagtgtcgttcagggacaggtgtgacctcaccata
aacaacaggtttgagcaggccttcatcaatagactccttgcagaagagatcaacgtaaag
agacagtatttctggacgggcctccaggacataaagacttcaggggagtaccagtgggtc
actcaggatggctcgggaaccaacatcacatacaccaactggggcgtgtttgaaccagcc
ctagcagggggctgtgcagtgatgtccacagccaagcctctgggtaactgggtggtaaag
aactgcaccatgtttaaagctggctccatctgtaagagagacatcgccgctccacagccc
ctagagcctgagcctgaccctaacctcccctgtcccgatggatggacatccaggcctggc
atttcctactgctacaaggtgttccacgaggagaggctgagtcgtaagcggtcctgggag
gaggcagagaggttctgtgaggccctgggggcccatctgcccagcttcaaccacccacag
gagatgaaagccctgcactatgttatgagagactccatcagtgatgaccggttcttctgg
gtggggctgaacaggagaaacccagctgctagttcctgggagtggagtgacaacaggcct
gtgtccatggccattttcccccaagagttccacgaggatgacgagtacaaccggggctgc
gcagcctttaagacactgaaaggaaccttaaagagtttttttgtcttcctgatgcacgaa
ttccctcctctgccgttctacgccaccccattccactgtgacgtcaggctggagtgggtc
tgccagatccccgcaggaaaaactcccgagaacccagagtggtacaatcctggtgggcac
catgagacatccatattcattgacggtaacgagttctggtttgtgacggaaccaaagctg
ccatatgaggaggctagtttgtactgcaacagcaacggcagcaagttggcagcaccacaa
agctccaacgcagccatacagatccataataatctgccacagatgtcggcaggaaagcag
agctggtgggtggatgtaagagacactggacactacttccccataaggttaccccttatg
caaaactaccgggctacgttcctgggcaggtgtacaaccatcagtgacaagaacatcttc
ccagagtacgagtacagctgtgagctgcggctgccattcgtgtgtgagagacacaacacc
acggctatagagacccactctggagagcctcaccccaatggtctgccctgtgagagcggc
tatttactcttcagggacaagtgctacgtggtgatcacgcctctgtacgttacttttcaa
cacgccaacgagcactgtcagtcaatgagaggaactctactcactatcacagaccaagtt
gaacaggactttgtgacctccctgttgccggcgcagccccgtaagacgtggattggcctg
aagctcaaacagcaggacccagagtgggtggatgactccccggtctcctacctcaacttt
aaccccctgcttcacggcctacgcaggcctattctcatcaactttcatgacccagagagc
atggagctgtgtgtcttcatgttcaacgaccccagctctgctatgatgggctcctgggac
tacaccccctgctctgaccagcagcatgtggccatctgccagcactacgcagacaagcca
gaggagccccagttccagttggagccgttccaggtcaacaatcacacctttaagctgctt
cagaagaacatgacgtggcacgaggctctggcggagtgcaggaaccagaacatggacctg
gccagcgtagccgacaccctgcagcagtcagtcctcaccgtgcacgtcacccgcgcacgc
agccccatgtggatcggcctcttcagcgcagacgttggtgtccattaccgctggacagac
cacagtcacacggtgtttagtcgctggtcctcagagcccaccgttggacactgtgtcttc
ctggacacggatggcttctggaaggctacagagtgtatggaacagttggcaggggctatc
tgccatgttccacatgaagagaatgtcaccacccatgaggacaacgctgtgaactgtcct
cacaagagcagcggaccaaactggatccccttcaagaacaactgctacaccttccaactg
gcatcgtccagatgggaagagtttgacaagggccagatacttcagacatgcaagaaactg
gctcctgatgcagacatcctgaccatcaggaacgtagtggagaatgtgtttgtgaaggag
cagctccttcccttcaaagacctggtgcagtttgtctggctaggggtgttcaacgatgac
aacgataaccagatgaagtggtatgacggtaccaacgtccagtactctaactgggtcgat
ggaagaccaagcttctcagccagcgatgagttcatggcaggtctcaacactgacggagtc
tggaagatattcactaacaaacaccacttcagttccttcaagcagagaagcatcgtggcc
tgcaaactggataaagactctaaggaccaatacaatcagtcggccagggactttgagcgc
tatggcaacctgagctaccacgtgataaccaggaagttgagctggttccaggccctggag
gagtgtggccgcggcaacggacacctggccagcgtgcatggcaccaggcacaacgctcac
atagagcttatcgccaagcgagacggcttcccgctgtggatcggtctgtccagtcaggat
gctagtggctctcagtcttatgagtggtccgatgggactaagtatcactacagtcaggcg
ggactctctgacactgttgtcacgtccagctcagaccctcagagtgtctgtgtgtacatc
actccccatggcacctggatgagaatggactgcaatgccaagctggacggagccatctgc
tacaacacaaccgtcaccacccccactcagagatcgaacctcgcagctccccaggtggcc
aacaactgccctcagaacagtggctctcagaacagtggctctaagtgggttgagcaccag
gaccactgctatgcttttgacatgaccttctataactactctgtgtacagcatggaggat
gccaagagcatctgtgaaaggcttgatgcacagctgctgaccataatgaccaaagaggag
aatgactttgtctctggctacatggcagacaaccctctcatcaccagtagggtgtggctc
ggcatggacctggacaaacaaggtcagccagtgggctgggtggacggttcctctctggcc
ttctctaactgggagaccaacggttctgctagtggggtgaagacagcgacccagcagaac
ccctgtgctgtcatggtgtctgccgacggaggcatctggagcagagtcagctgcaaggac
agccacagccgcatcgtctgcaaagtacccacacggtcagggagcgccccggtggtgctg
gtcttcttcctggtcgtcctcacctctctcctggcggcaatcggcttcgtcgtttataag
aagagcagggccagattcaactccaccgtgcgctacaggagaaccattgatgatgctgac
agcactagtattatggatgcagagtga
DBGET
integrated database retrieval system
