KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112266506
Entry
112266506         CDS       T05605                                 
Name
(RefSeq) integrin beta-6
  KO
K06589  integrin beta 6
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510  Focal adhesion
otw04512  ECM-receptor interaction
otw04810  Regulation of actin cytoskeleton
otw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112266506
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112266506
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112266506
   04810 Regulation of actin cytoskeleton
    112266506
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112266506
   04515 Cell adhesion molecules [BR:otw04515]
    112266506
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   112266506
Cell adhesion molecules [BR:otw04515]
 Integrins
  Integrin beta subunits
   112266506
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt I-EGF_1 PSI_integrin EGF_2
Other DBs
NCBI-GeneID: 112266506
NCBI-ProteinID: XP_024299791
LinkDB
Position
LG14:complement(9897990..9916050)
AA seq 786 aa
MGTAVLLLLILRHWINNVEGTCSVGSAVTCDECLQLGPHCAWCTQENFTDSFLISERCDT
PYLLQERGCPQDQVEFPVTTSEVLRDQPLGKKTGNTNSTEISPQKMALKLRTGSEVTFQV
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELDNPCRSVDESCLPTFGYKHVLPLTSSTEKFNNIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVDNNILLIFAVTENQKHNYENYASFIPGATVGVLESDSRNILEL
IVTAYKELRSEIELEVLGDTEDLQISFTAICQDGTVLPGQKRCSNVKAGDTVSFNVTVEL
SECLDGPQRFLIKPVGFQDPLEIDLESLCSCACQQTPEPNSSHCSLGRGSLECGSCLCDP
GYMGSKCECTEESVQSSNCKASGASESCSGQGECYCGQCVCHPSSFGRVYGAYCECDDFS
CVRFRGLLCGGHGDCDCGECVCHSGWIGEYCNCSSSRDTCVSEDGALCSGRGKCVCGKCV
CSMPGASGDTCERCPTCGDSCTSARTCVECHLQAEDEATEECVQRCSVPHVFVNNSTEYD
ESRSTLCTLKSENNCFISFSVVAGDAGSTVYNLKMYDCPEPPNIAMIVLGVSLSILTIGL
ILLGVWKLLISVHDRNEVAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSAGGPKVDI
HSMDGY
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgggaactgctgtacttctgctcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagtgcagtgacttgtgacgagtgtctccagcttggtccccactgt
gcatggtgcacacaagagaatttcacggactcgtttttaatcagtgagcgatgtgacaca
ccgtacctcctccaagagagaggctgtccccaggaccaggtggaattcccagtgaccact
tccgaggtcctccgggaccagccactcgggaagaagacaggaaataccaacagcacagag
atatcaccacagaagatggccctcaaactcagaactggcagtgaggtgaccttccaggtc
agtgtgcagcagacagaagactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaggagatg
gcaaagctcaccagtaaattcagacttggatttgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagctggataacccttgtaggagtgtggatgagagc
tgtctgccaacgtttggatacaaacacgtcctacccctcaccagcagcacagagaagttc
aacaatatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaggctgctgtctgtggggacaagataggctggaggaacgactccatg
cgtctgctggtgtttgtgagcgacgccgactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggacaataat
atcctgctgatattcgctgtgacggaaaatcagaaacacaactacgagaactatgcaagt
ttcatacctggcgccacggtgggggttctggagtcagattcaaggaacatcctggaactg
attgtgacggcgtataaagagctgcggtctgagatagagctggaggtgctaggagacaca
gaggatctacagatctccttcacagcgatctgtcaggatgggacggtactacctggacag
aaacgatgctccaacgtcaaagctggagacacggtctccttcaacgtgactgtagaactc
tctgagtgtctcgacggtccccagcgtttcctcatcaaaccggtgggctttcaggacccc
ctggagatagacctggagtccctgtgctcctgtgcctgtcagcagacccccgagcccaac
agcagccactgcagcctgggccggggatctctggagtgtggctcctgtctgtgtgatccc
gggtacatgggttccaagtgtgagtgtacggaggagagcgtccagagcagtaactgcaag
gccagtggcgcttcggagtcctgtagcgggcaaggggagtgttactgcggccagtgtgtg
tgtcacccgtctagtttcggacgcgtctacggggcctactgcgagtgtgacgacttctcg
tgtgtgaggttccgagggttactctgtggaggtcacggggactgtgactgcggcgagtgt
gtgtgtcatagcggctggataggggagtactgtaactgcagcagcagcagggacacgtgt
gtgtcggaggacggagcgctgtgcagcggacgggggaagtgtgtgtgcgggaagtgtgtg
tgttccatgcccggagcctctggagacacctgtgaaaggtgccctacctgtggagactcc
tgtacctcagctagaacctgtgtggagtgtcatctgcaagcagaagacgaggccacagag
gagtgtgtccaaaggtgcagcgtccctcacgtcttcgtcaacaattccacagaatacgat
gagagccggtccacactgtgtaccctaaagagtgagaacaactgcttcatctctttcagt
gtggtggctggagacgcagggagcactgtgtataatctaaagatgtacgactgtcctgag
ccccccaacatagctatgatagtactgggggtctctctgtccattctcaccatcggcctc
atcctgctgggggtgtggaagctgttgatctcagtccacgaccgcaatgaggtcgccaag
tttgaggccgagagggcaaaggctaaatggcagtcgggtacaaaccctctgtttagaagc
tcgacatcaacgttcaaaaatgtaacttataaaagtgcagggggaccgaaagttgatatt
cattcaatggatggctactga

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