Oncorhynchus tshawytscha (Chinook salmon): 112266549
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Entry
112266549 CDS
T05605
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112266549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112266549
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112266549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
ADSL_C
Motif
Other DBs
NCBI-GeneID:
112266549
NCBI-ProteinID:
XP_024299884
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All DBs
Position
LG14:complement(11418575..11421448)
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AA seq
301 aa
AA seq
DB search
MLATGAAVTTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
SSPHTRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPT
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaggagcagctgtaaccacggctctggcccaagtggatagggaaaagata
taccagtggatcaacgagctgtccagcccagagacccgcgagaatgccctgcttgagctc
agtaaaaaacgggagtccgtgccagatttggctccaatgctatggcactcctgtggaact
atagctgctctcctacaggaaattgtcaacatctacccctcaataaaccccccaaccctc
accgcgcaccagtccaacagagtatgcaacgcattagcacttctgcagtgtgtagcctct
catccagagacaagatcggcatttctggcagcacacattcctctattcctgtaccccttc
ttacacactgtcagcaaaacacgaccatttgagtacctccgactcaccagcctaggagtc
atcggtgccttggtcaaaacagatgagcaggaagtgatcaacttcctgttgacaacagaa
atcattcccctgtgccttcgcataatggagtctggcagtgagctttccaaaacggtagca
acttttatactacagaaaatactccttgatgacacagggctggcatacatttgccaaacg
tatgaacgcttctcccatgtggccatgatacttggcaaaatggttcttcagctctccaaa
gagccctctgctcgtcttttgaaacatgttgtccgctgttacctacgcctgtcagacaac
tccagcccccacaccagagcccgagaggccctccgtcagtgtctaccagaccagcttaaa
gacaccacgtttgcccaagtcctgaaggacgataccaccaccaaacgctggttggcacag
ctggtgaagaacctacaggaaggccaagtcacagaccccagaggcatccctctgcccaca
cagtag
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