Oncorhynchus tshawytscha (Chinook salmon): 112266617
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Entry
112266617 CDS
T05605
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112266617
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112266617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
112266617
NCBI-ProteinID:
XP_024300028
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All DBs
Position
LG02:57149544..57165155
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AA seq
865 aa
AA seq
DB search
MAVVIRMQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRN
GGAIKGSKVSLLLSSKTEMQNMIELSRRRFKTGNVEGAAGNGRRPGPPVNTCGRGSLPNT
LQEFSNTTPATVTTAASAHETISNKNVSTFATTGMGNMPPSFSNNFSSPNLTMGSSMRTA
MSSRNSVPLPIHALTTMPSLPPMPSIPPMPLPPPVSSVPPVPTVSPLTQGPPVLPMSLSH
MGSMPPFNPGVPPPSGLAPNHMFVGHMNPLLNLQAHMKAAIGNSDELYVHLQGLPFSATE
MDIGEFFCGLGVDSIRLVRDNIGRSSGRALAKFFSPQDTFEALKRSSGMLRQRYVDISPA
TESQWMSVSSGGNGVGGQAHSKSSNVPQDQHHRSNMNSASPSTRDHARSRSPHNKEFCVY
LKGLPYEAVNKQICEFFKKLDIMEDRIYIAYGPTGRATGEGFVQLKNEMDYKVALSCHMQ
YMGSRFIQVHPISKKAMFEKIDSIRQRMQGVDKKNNSESGKSPRNCAHISNIPYNVSKKD
VHLFLEGIAVFEESLKVLVDSSGNGLGQAVVQFRVEEDALNAERLHRQKLNGRDAFVHLV
TFEQMKEIERNPPPQVKRGQKFEGQAHGHAQAQNPIQAQAHPFASITGEEFNFLRNTVGN
LGNGPFAQFTVPGNGIVGPPPLPPFAASLENVAHSIPPPMVAGHLPGAVLAPPSFRPGSN
NGPPGFGPEGMRDRPPFDNGYRKSGGHNNRGSGQGRLEVRPQSALGRGPGSDPLREQSHG
GPGNPRGPTIVKIQNMPFTVTVDEIIDFFYGYQVLSGSVCQQFSEKGLPTGEAMVAFESH
EEASSAVMDLNDRPIGARKVKITLG
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcatgcagggtctcccgatagtggcggggaccatggacatacgc
catttcttctctggattgaccatcccagatggtggggtgcatattgtagggggtgaacat
ggtgaggcttttattgttttcgccacagatgaagatgccaggcttggcatgatgcgtaac
gggggagcaatcaaaggttcaaaagtgtcacttttgctgagcagcaagaccgagatgcag
aatatgattgagcttagccgcaggcgttttaaaacgggcaatgtagagggagcagcagga
aatggtagaaggccaggtccccccgtcaacacatgtgggaggggcagtctacccaacact
ttacaagagttcagcaacaccacaccagccaccgtcaccacagctgcctctgcacatgaa
accataagcaacaaaaatgtgtccacgtttgccaccactggcatgggaaacatgcccccc
agtttcagcaacaacttcagcagcccaaatctcaccatgggatccagtatgagaacagcc
atgagctcccgcaactctgtaccactacctattcacgctttgacaaccatgccatccttg
ccacccatgccttccataccccccatgccacttccaccaccagtgtcctctgtgcctcct
gttcccactgtgtcacctttaacccaaggcccccctgtccttcccatgagtctgtcccac
atgggctcaatgccaccattcaacccaggtgtcccaccccctagtggactggccccaaat
cacatgtttgttggccatatgaaccctctgttaaatctccaggcacacatgaaggcagca
ataggtaattctgacgagttatatgtccaccttcaaggcctgcccttctcagctactgaa
atggatattggggagtttttctgtgggttaggggtggactccatccgactggtcagggac
aacattggccggagtagcggcagggccctggccaagttcttttcccctcaggacactttt
gaggcgctcaaaagaagcagcggaatgttaaggcagaggtacgtggacatctctccagcc
acagagagccagtggatgagtgtcagcagtggtggcaacggggttggagggcaagcccac
tcaaaatccagtaatgtgccccaagaccagcaccaccgcagcaacatgaattcagcatct
ccttcaaccagagatcatgcaaggtctcgctcccctcacaacaaggagttctgtgtctac
ctaaaaggcctgccctacgaagcagtaaataaacagatctgtgagttcttcaaaaagctg
gacattatggaagaccgcatttacattgcttatggacccactggccgagctacaggtgag
ggctttgtccagttgaaaaatgaaatggattacaaggttgccctcagctgtcacatgcag
tatatgggaagccgattcatacaagttcaccccatcagtaagaaagctatgtttgaaaag
attgattccattcgtcaaaggatgcagggtgttgataagaaaaacaactctgagtccggc
aagagccctagaaactgtgcacacatctcaaatattccatataatgtgtcaaagaaagat
gtccatctgtttctggaaggcattgcagtatttgaagaaagtctgaaagttctggttgac
agcagtggtaatggtctaggtcaggctgttgtgcagttcagggtagaggaggatgcgcta
aatgctgagagactacacaggcagaagttaaatggcagagatgcctttgtgcatttggtc
acctttgagcagatgaaggaaatcgagagaaacccaccaccacaggttaagagaggccag
aaatttgaaggccaggcacacggccatgctcaggcacagaatcctattcaagcccaagct
cacccctttgccagtataacaggagaagagttcaacttcctcagaaacactgttggcaat
ttaggcaatggtccttttgctcaatttactgtcccaggtaatggaatagtgggccctcct
cctctacccccatttgcagcaagtctagagaatgtagcccatagcattcccccacccatg
gttgctggtcacttgcctggagcagttctggcacccccaagcttccgaccaggtagcaac
aatggcccacctggctttggaccagagggcatgagggacaggccaccttttgacaacggc
tatagaaagagcggaggccataacaaccgaggaagtggccaagggcgtttagaagtgcgc
cctcagtctgccttgggccgtggccctggctctgaccctctgagagagcagtcacacgga
ggccctggtaaccctcgtggaccaaccattgtaaagatccaaaacatgcctttcaccgta
acagtcgatgagatcatagatttcttttatgggtatcaagtgctatctggttcagtctgt
caacagttcagtgaaaagggcctgcccactggtgaggcaatggttgcctttgagtcacac
gaggaggcatcatctgctgtcatggatttaaatgataggcctattggggctaggaaagtg
aagataaccctaggataa
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