KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112266641
Entry
112266641         CDS       T05605                                 
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112266641 (rnf115b)
   04121 Ubiquitin system [BR:otw04121]
    112266641 (rnf115b)
Enzymes [BR:otw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112266641 (rnf115b)
Membrane trafficking [BR:otw04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    112266641 (rnf115b)
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112266641 (rnf115b)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-rbx1 zf-RING_UBOX zinc_ribbon_9 zf-RING_5 zf-ANAPC11 zf-C3HC4_3 HypA C1_2 zf-HC5HC2H
Other DBs
NCBI-GeneID: 112266641
NCBI-ProteinID: XP_024300073
LinkDB
Position
LG13:43277879..43285930
AA seq 301 aa
MAEAAAAPQNRFFCHCCKGEIDPKLPEFTCPRCQSDFIEEVTEDSSLLENSSTAEANDDA
GTLFSELWQLLFMEHSALLSDPSTSESDQSHLQAAAVEGDVEGPSEVPVASVGGTDPLVP
EPERPSHPPSQGRRQSHTPAVEGIVQQFLAGLFANNGNPGIAPAALSGMLHSNPGDYAWG
QGGLDAVITELLGQFEGTGPPPAEKEMISSLPTVNVSQEQTDSRLECPVCREEYSMGESV
KQLPCLHYFHSDCIVPWLELHDTCPVCRKSLDGIDQSIQPPPEPPETLSIRTDPQEERQA
I
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcggaggctgcggcggcaccacaaaaccgttttttctgtcactgttgtaaaggtgaa
atcgaccctaaactcccggaattcacatgccccaggtgtcagtccgatttcattgaggag
gtgacagaagactccagtctcttggagaacagcagcactgcagaggccaatgatgatgca
ggcacactcttttcagagctgtggcagctgctgtttatggaacactctgctcttctctcg
gacccctccacctctgagtctgaccagagccatctacaggctgctgcagtggagggagac
gtagagggcccttctgaagtgcctgtggcctctgtgggaggcacagatcctttagtgcct
gaaccggaacgcccctctcatccgcctagccaggggaggcgacagtcccacacgccagca
gtggagggtattgtgcagcagtttttggctggtctgtttgccaacaatggaaatcctggc
atcgcaccagctgcactgtctggcatgctccattcaaatccaggggactatgcctggggt
cagggaggtctagacgcagttatcacagagttgttaggtcagtttgagggcacaggtcca
cctcctgcagagaaggagatgatctcatccctccccacagtcaacgtctctcaagaacag
acagatagcagactggagtgtccagtatgtagggaggagtactccatgggagagtctgtc
aaacagctgccctgcctccattatttccacagtgactgcatagtgccatggcttgaactg
cacgatacttgtcctgtgtgtcgtaaaagtcttgacggcatcgaccagagcatccagccc
ccaccagaacccccagagaccctctccatcaggacagaccctcaggaggagagacaggct
atttga

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