Oncorhynchus tshawytscha (Chinook salmon): 112266646
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Entry
112266646 CDS
T05605
Symbol
matn4
Name
(RefSeq) matrilin-4 isoform X1
KO
K19467
matrilin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112266646 (matn4)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
112266646 (matn4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
VWA_2
cEGF
EGF_CA
EGF
EGF_LRP2
Matrilin_ccoil
EGF_3
hEGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
112266646
NCBI-ProteinID:
XP_024300082
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Position
LG02:57071120..57111042
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AA seq
656 aa
AA seq
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MRQLCVCVSVLLALATMAVARPKEGPEQKCKSGPVDLIFIIDSSRSVRPHEFETMRKFMI
DIIHTLDMEANATRVGVVQYSSQVQNEFSLKTHGKLQGMVKGINEIVPLAQGTMTGLAIK
YVMNHAFTAAEGDRPKVPNVAVIVTDGRPQDRVVEVAAEARDKGIEIYAVGVARADLTSL
RAMASPPIEDHVFLVESFDLIYQFGLQFQDKLCGMDLCLESDHGCEHLCESSPRSFHCLC
LPGYTLNEDGKTCKAIDLCAGGKHDCEQICIPSPGTFTCGCNTGYTLNDDKKTCTMIDLC
AEGKHDCEQICITSLGTFTCNCKTGYTLNDDKITCTMIDLCAEGKHDCEQICIASPGAFI
CDCSAGFKLHDDKKTCTNLCNTVEHGCEHQCISTPDSYYCICPEGQLLAEDGKGCRTCRS
ANIDLVLLIDGSKSVRPQNFELVKQFVNQVVDSLDVSAHGTRVGLVQYSSHVRTEFALKM
YEKTDDIKKAVMNVEYMEKGTMTGLALKHMMENSFSEAEGARKNIPRVGLVFTDGRSQDD
ITEWAKKAKEEGITMYAVGVGKAMEDELREIASEPLDKHFFYTTDFTFINQIAENLKLNV
CAEESQGEIEVKDPCACESLVEFQQATMSTLEQLKTKLAGMTAQLEDMENQLLSRK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctgtgtgtctgtgtgtctgtcctgctagccttggccaccatggctgtggct
aggcctaaagaaggaccggagcagaagtgcaagtctggcccagtggacctcatattcatt
attgacagctctcgaagtgtgcggccccacgagtttgagaccatgcgcaagtttatgatt
gacatcatccacacgctggacatggaggcgaatgccacccgagtgggcgtggtgcagtac
tccagccaggtccagaatgaattctctctcaagacccatggcaagctgcagggcatggtg
aaaggcatcaatgagatcgtccccctggcgcagggcaccatgacgggcctggccatcaag
tacgtcatgaaccatgccttcacggcagccgagggcgaccgacccaaggtgcccaatgtg
gccgtcatcgtaacggacgggcggccccaggaccgcgtggtggaggtagcagccgaggct
cgagacaagggaatcgagatctatgctgtgggcgttgctcgggcggatttgacctcgctg
cgtgctatggcgtcgccgcccattgaggaccatgtcttcctggtggagtcttttgacctg
atctaccagtttggcctgcagttccaggacaagctctgcgggatggatctgtgcctggag
tctgaccatggctgtgagcacctctgtgagagctcccctcgttctttccactgcctgtgt
ctgccagggtacactctcaacgaggatggcaagacctgtaaagccatagacctgtgtgct
ggggggaagcatgactgtgagcagatctgtatcccctcccctggaaccttcacctgcggc
tgcaacaccggctacacgctcaacgacgacaagaagacctgcacaatgatagacctgtgt
gctgaggggaagcatgactgtgagcagatctgtatcacctctctgggcaccttcacctgc
aactgcaagactggctacaccctcaacgatgacaagattacctgcacaatgatagacctg
tgtgctgaggggaagcatgactgtgagcagatctgtatcgcctcccctggagccttcatc
tgtgactgcagcgctggctttaagctccacgatgacaagaagacctgcacaaacctgtgt
aacacagtggagcatggctgtgagcatcagtgtatcagtacaccagactcctactactgc
atctgccctgagggacagctactggcagaggatggcaagggctgccgaacctgcagatcg
gccaacattgacctggtcctcctcatcgatggctccaagagcgtgcgtccccagaacttt
gagctggtcaagcagtttgtcaaccaggtggtggactccctggatgtgtccgcccatggg
actcgagtgggcctagtgcagtactccagccacgtgcgcacagagttcgccctcaaaatg
tacgagaagacggatgacatcaagaaggcggtgatgaacgtggagtacatggagaagggc
accatgacgggcctggccctcaagcacatgatggagaacagcttctcggaggccgagggt
gcccgcaagaacatccctcgcgtgggcctggtcttcactgacggccgctctcaggacgac
atcactgagtgggccaagaaggccaaagaagaaggtatcaccatgtatgctgttggtgtt
gggaaggccatggaggatgagctgcgtgagattgcctcagagccactagacaagcacttc
ttctataccactgacttcactttcatcaaccagatagccgagaacctcaagctcaatgtc
tgtgcagaggagagccagggagagattgaggtgaaagacccatgtgcctgtgagagtctg
gttgagttccagcaagcaacaatgtccactctggagcagctgaaaacaaaactggcgggt
atgactgcacaattggaggacatggagaaccagctgctgtcacgaaaatga
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