Oncorhynchus tshawytscha (Chinook salmon): 112266779
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Entry
112266779 CDS
T05605
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112266779
04121 Ubiquitin system [BR:
otw04121
]
112266779
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112266779
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Atypical E3
112266779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112266779
NCBI-ProteinID:
XP_024300337
UniProt:
A0A8C8BZX3
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All DBs
Position
LG14:complement(22861003..22863606)
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AA seq
633 aa
AA seq
DB search
MSSSQSSSRRQWCCYLCDLPKMPWAMIWDFSETVCRGCVNYEGADRIEFLIETARHLKIT
HGMQGDRSPGPQPTKHGPGGRDGPMEGGRPPPERFERGRGDYGAPARLPNGLHRIDDGGP
QHDVSGQSPNNARRPMVCTVPPNLMTQGLVGAPHGLLAAVPGLNTRVGGTPLTLSAPMLN
EITKRQLSMGMGVASFLSPEFEKELREKQRNAEALAELSESVRNRADDWAGRPKAVRGAL
LTLSGCTPFNVRFKKDHSLLGRIFAFDAKLTLDFELKIFAEYPCGSGYMFSSLAALVKQM
FHDSQKDSGNKVINLGLKYVEYEKRHGAGDWRLLSELLSDSVRAFKDTPGPDVLPQPYLD
TSCSMLPTALCHMARSAPPARLRRRKASPELQGGEVVTTEEQLRQHWPMGMYPGMAIHLA
ASSLPSTSQPPPHQEGSASHSHSSDPSPITALMSVADNAGAAAGQSPREAPSSSSSSGGG
GLGHSSLAVRQSSSSPMAACPAGQQRHLASRNGEPQGASNSTGGTTAALPLAGASDQGAG
DPSGSSGPPLCCTICHERLEDTHFVQCPSVAAHKFCFPCTRDFIRSQGAGSEMFCPSGER
CPLVGSNVPWAFMQGEVTTILAGDVKVKKERDP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcccagtcgtcttcaaggcggcagtggtgctgttacctttgcgatttgcct
aagatgccatgggctatgatctgggactttagcgagactgtctgccgaggctgtgtgaat
tatgaaggggcagaccgtattgaattcctcatagagacggccaggcatttgaaaataact
catggtatgcagggtgacagatccccgggtccacagcccaccaaacatggcccaggtgga
agagatggacctatggagggtggtaggccacctcctgaacgctttgaaaggggtagaggg
gactacggagccccagcacggctccccaatggtctgcacagaatcgatgacgggggccca
caacatgatgtcagtggacagagccctaacaacgccagacgacccatggtgtgtaccgtt
ccacccaatttaatgacacaaggccttgtgggggctccgcacgggttgctagcagctgtg
cccggtttaaataccagagtcgggggaacccccctcaccctctctgcccccatgctgaac
gagatcaccaagaggcagctgagcatgggcatgggtgtggcctccttcctgagccctgag
tttgagaaggagctgagggagaagcagaggaacgcagaggctctggccgagctgtcagag
agtgtacggaaccgagcagatgactgggccggccgacccaaggctgtacgaggggccctg
ctcaccctctccggctgcacccccttcaacgtgcgcttcaagaaggaccacagcctgctg
gggcggatctttgccttcgatgccaagctgacgctggactttgagctgaaaatctttgca
gagtacccgtgcggctcggggtatatgttctccagcttggcggcgctggtcaagcagatg
ttccacgacagccagaaagactctgggaacaaggtgatcaacttgggcctgaagtatgtg
gagtacgagaaaaggcatggcgcgggggactggcgactgctctctgagctactgagtgat
tcggtacgggcctttaaggacacccccggccctgacgttctcccccagccctacctggac
accagctgctccatgctgcccacagcgctgtgtcacatggcccgctcggcaccaccagcc
cgcctgcgccggaggaaggcttccccagagctccagggtggagaggtagtgaccacagag
gagcagctccggcagcactggcccatggggatgtacccgggcatggctatccacctagct
gcctcctccctacccagcactagccagccacctcctcaccaggagggctcggcctcccac
tcccacagcagcgacccctcccccatcacagcactgatgagcgtggctgacaacgcgggt
gcagccgctggtcagtcacccagagaagcccctagcagcagcagcagtagtggtggtgga
ggcctgggccactcctccttggcagtgagacaaagcagcagcagccccatggcagcctgc
cctgcagggcagcagcgccacctggcctccaggaacggggaaccccagggagctagcaac
tctacagggggcaccacggcagctctccccctggctggggcctcggaccagggagcaggg
gacccctccggctcctctggtccccctctctgctgcaccatctgccacgagcgcttggag
gatactcactttgtccagtgcccgtctgttgcggcccataaattctgcttcccttgcacc
agagactttatccggagccagggggccggcagcgagatgttttgccccagtggagagagg
tgtcccctggtaggctccaacgtgccctgggccttcatgcagggagaggtcactaccatc
ctggctggagacgtcaaggtgaagaaggagcgcgacccctaa
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