Oncorhynchus tshawytscha (Chinook salmon): 112266855
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Entry
112266855 CDS
T05605
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04110
Cell cycle
otw04218
Cellular senescence
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112266855 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112266855 (rbl1)
04218 Cellular senescence
112266855 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112266855 (rbl1)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
112266855 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
112266855
NCBI-ProteinID:
XP_024300511
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All DBs
Position
LG02:complement(56517556..56587431)
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AA seq
1056 aa
AA seq
DB search
MRGDESDSDSGRTDESSVRKSLEMLCQELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWL
ACSLYAACRKGSTPTVGKGVMEGNCVSLTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFR
NRMGRLERTFEVSTVIFRKFEPIFMDMFQDPQGEPPRQPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLVNPLFKGMPSIFRLENN
TPDEPPCVIDRLCELHDGLVVEAKGIKEHYFKPYIKRLFERQILKGNEELLTDLLDTPNF
IDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKAAPEPRACQLSARMQVESNL
QQHFEKKRTLAPSTPLTGRRYLKEKELLVTPVSSATQSVSRLQSMVSGLRSAPSEALMQI
FKSCSRDPIVAILSRVKTLGETFKQHYTKDSEELPGSHMDFAENRMKLAEILYYKILENV
MAQETRRLHGKDMAVLLEQDIFHCSLMACCLEVVLFAYSSQRTFPWIISIFKLRPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLECRAWTADSVLWEALEQAHNKVPTVEEVNFPS
SFDTGNSSAGPSHLPLVALSPIIHPRIREFRTGLSSARKDIPPSPLSVHDRYSSPAAGSA
KRRLFGDDSSSQAQQSPSLAKRLMFTPGGTLKIDTPTILNMTTANGQQLSIPLQGIKNDL
GGITLIQVQTRGEPGSPITAQVLLTASPSRPIPAPQAQPDPQQSRPRRTGSLALFFRKVY
HLASVRLRDLCVRLDISAELRGKIWTCFEHSIVQCPELMKDRHLDQLLLCSIYIISKITK
EGHTFQDIMKCYRSQPQASSHVYRSVLIRPSSTREQPSDENMEVDPSGGTSLISAAEKAD
QSSREEALAQGEERGDLIQFYNSVYVLKIKGFALRYAAPSMDNRMEAPPLSPFPSMRAQP
LSPRRISQRHSIYVSPHKNGSCLTPNSAYTYKINGSPSKELTDINRMIRQGGVSRKRAFS
MEGDYLGESPTKRVCPESEDVLLKRLQDVVSERAHH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagacgagtcagattccgactccgggcggacggacgagagctctgtccgaaag
agcttggaaatgctttgtcaggagctgaatatggacgaacagacggcatctgaagccatg
caaaacttcaagtcgatttggaatacatacacactggagggggaagtagttcattggcta
gcctgctctctctatgcagcctgcagaaagggttccacacccactgtgggtaagggggtg
atggaaggcaactgtgtgtccctgactcgaattctcaggacgtcaaaactgagtttgatt
cagttcttcaacaagatgaagaaatggtcggatatgtccaacttatctcaggaatttcgg
aatcgcatgggccgcctggagagaacctttgaagtgtcaactgtgatctttcggaagttt
gagcccatattcatggacatgttccaggatcctcaaggggagcccccacgacagcctaga
agcagaaaacacaggcgcctgccctgtcacgtcagcgatgtattcaaattctgctggacc
ctgtttgtgtacactaaaggaaatttccgtatgattggcgatgacttggtgaactcatac
cacctcctgctctgctgcttggacttggtgtttggaaatgccctgctatgctccaacagg
aaagaccttgtcaacccacttttcaaaggcatgcccagcatcttcaggttggaaaacaac
accccggacgagccgccatgtgtcatcgatcggctgtgtgagctacacgatggcttggtg
gtagaggctaagggcatcaaggagcactacttcaagccctacattaaaaggctctttgag
cggcagatacttaaagggaatgaggagctgctcactgatcttctggacacaccaaatttc
atagataacaataaagcgataaaccgggagtatgaggagtatgtgctgactgtgggggac
tttgacgagagggtgttcctgggggcggatgccgatgaggagatcgggacacccaggaag
gctgcaccagaaccccgggcctgccagctgtcagcccgcatgcaggtggagagcaacctg
caacagcactttgagaagaagcgcaccctggccccctccactcctctgacaggcaggcgt
tacctgaaggagaaggagctactggtgacccctgtgtcctcggccacgcaaagcgtcagc
cgactccagagcatggtctcgggcctgcgtagcgcccccagcgaggccctgatgcagata
ttcaagtcatgttcgcgggaccccatcgtagccattctgagcagagtgaaaaccctgggc
gagacgttcaagcaacattacacaaaggactcagaggagctgcctggatcacacatggat
tttgctgagaacaggatgaagctggctgaaatcctctattacaagatccttgagaatgtc
atggcccaagagacaaggaggctacacggcaaagacatggctgtgctgctggagcaggac
atcttccactgctctctgatggcctgctgtctggaggtggtgctgtttgcctacagctcc
cagcgcaccttcccctggatcatcagcatcttcaaactacgaccgttctacttcttcaag
gtgattgaggtgttcatccgctcggaagagggtctgtcccgggacatggtgaagcacctg
aactccatcgaagagcaggtgctggagtgccgggcctggacagcagactctgtgctgtgg
gaggccctggagcaggctcacaacaaggtccccaccgtggaggaggtgaacttccccagt
agttttgacacggggaacagcagtgctggtccctcccacctccctctggtggccctctcc
cccatcatccaccctcgcatccgcgagtttaggacgggcctgagcagcgcacgcaaagac
attcctccgtcgcccttatccgtccacgaccgttacagctccccggcggcaggcagtgcc
aagaggcgtctgtttggggacgacagcagcagccaggcccagcagtctccgtcccttgcc
aagaggctcatgttcacacccggcgggacgctgaagatcgacactcccaccatactcaat
atgaccacagccaacggccagcagctcagcatcccactgcaaggtataaagaatgatctg
ggaggcatcacgctgatccaggtacagaccagaggggagcctggcagtcccattacagcc
caggtcctcttgacagcctcccccagccggcccatcccggcaccccaggcccagccagac
ccccaacagagccggccccgacgcaccggctccttggccctcttcttcaggaaggtgtac
cacctggccagtgtgcggctgagagatctgtgcgttaggctggacatctcggcagagctg
cggggcaagatctggacttgctttgagcattctattgtccagtgtccggagctgatgaaa
gacagacacctggaccagctcctcctttgctccatctacataatctctaagattacgaaa
gaaggccacacattccaggacatcatgaaatgttaccgcagtcaaccacaagccagcagt
catgtctaccgcagtgtcctcatccgacccagcagcaccagagaacagccctcagacgag
aacatggaagtggacccctctggtggaacatccttaatttcagctgctgagaaagccgac
cagagcagcagagaggaggctcttgcccaaggcgaggagcgcggcgacctcatccagttc
tacaactctgtctatgtgctgaagattaagggctttgccctccgatacgccgcccccagc
atggacaacaggatggaggcccctcctctttccccgttcccctcgatgagagcccagccc
ctgtccccccgccgcatctctcagagacactcgatctacgtgtccccacacaagaacggc
tcctgtctcaccccgaactctgcctacacctacaagatcaacggcagcccctccaaagaa
ctgactgacatcaaccggatgatccgccagggcggggtgagcaggaaaagggccttttcc
atggagggcgactacttgggcgagtcccccaccaaacgggtgtgtcccgagagcgaggat
gtgctgctcaaacggctgcaggacgtggtcagcgagagagcccaccactga
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