Oncorhynchus tshawytscha (Chinook salmon): 112266905
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Entry
112266905 CDS
T05605
Name
(RefSeq) huntingtin-interacting protein 1-like isoform X1
KO
K04559
huntingtin interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112266905
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112266905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
HOOK
Motif
Other DBs
NCBI-GeneID:
112266905
NCBI-ProteinID:
XP_042153184
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All DBs
Position
LG14:complement(26958075..27006343)
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AA seq
1051 aa
AA seq
DB search
MDRVKSSMQQVPNPIPKALIRRTGGANSLELEKENFERGQAVSINKAINTQEVAVKEKHA
RTCILGTHHEKGAHTFWAAVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVIKDSMRNKAD
LSDMSRMWGHLSEGYGKLCSIYLKLLITKMEFHIKNPRFPGNLQMSNRQLDEAGENDVNN
FFQLTVEMFDYLECELNLFLGVFSSLDMSRSVSVTAAGQCRLAPLIQVILDSSHLYDYTV
KLLFKLHSCLPADTLQGHRDRFQEQFKKLKSLFYRSSNLQYFKRLIQIPQLPENPPNFLR
ASALSEHISPVVVIPAESSSPETEHMVDLVTEDLVDTDIPVQPATVVEPRFDDLFGTSAA
TDPFNFNNQNGMRKDDKDRLIEQLTREIQALREELESFRLESGRLCQALRGRVNELEAEL
AEQSHLRMQALGESEFLRAELDDLRRVKEDTEKEQRSLTEIERKAVANEQRYVKLKEKYT
ELVQSHADLLRKNAEVTRQMTVARAAQDEVDSVRREMQEKVKAAQEAAARREQEQVEQLQ
ELQRELISSRVELDTLKSTMASSQQSSEELSSQLSTVESEKVELAGSLLKKEEELAGLGE
ELERVQSSLASERESGVKTAEALQNQLNEKESREQALESQLVAARWSTLQGAVEEAERIV
QDSLAQLDDPAHISCTSSADYLASRCQASLDCMDRLHSARDGYLADNTGVSELVRAVTHL
AHLVGDTIVQGSATSHMVPVEQADALSDSVKACGAEALALLGQMKEQESLATADSATLRA
ALDGILATAEKLRPRGLELQQGELGDLVEQEMAATSAAVESAAARIEDMLNKSRAVDTGV
KMEVNERILASCTDLMQAIKELVLSSKDLQRDIVDSGRGAASMKEFYVKNSRWTEGLISA
SKAVGWGATVMVDAADLVVQGKGKYEELMVCSHEIAASTAQLVAASKVKADKDNANLGRL
KLASKGVTQATAGVVASTKSGKSQIEEKDTMDFSSMTLTQIKRQEMDSQVSVLELETKLQ
KERERLGELRKKHYELAGVAEGWGEEDEGTG
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagtgaagagctccatgcagcaagtaccgaacccaattcccaaagcgctgatt
cgtcggaccggtggtgccaacagtttagaacttgaaaaggagaactttgaacgcggtcag
gctgtgagcatcaacaaggccatcaacacccaggaggtcgccgtcaaagagaagcatgcc
aggacctgtatcttggggacccaccatgagaagggcgcccacactttctgggcggcggtc
aatcgtctaccgctctccagcaatgcggtgctctgctggaagttttgccacgtcttccac
aagctgctgcgagacggccatcccaacgtgataaaggactcgatgaggaacaaggctgac
ctgagtgacatgagtagaatgtggggtcacctgagtgaaggatatgggaagttgtgcagc
atctacctcaaactgcttatcaccaagatggagttccacatcaaaaatccccgtttcccc
ggcaaccttcagatgtcaaacaggcagcttgacgaggcgggagagaacgacgtcaacaac
ttcttccagttgacagtagagatgttcgactacctggagtgtgagctcaacctattcctt
ggtgtgttcagctccctggacatgtcgcggtctgtgtcggtgacggcggcgggccagtgt
cgcctggctcccctgatccaggtaatcctggacagcagccacctgtatgactacaccgtc
aagctgctcttcaagctgcactcctgccttcctgctgacacactccagggccacagagac
cgcttccaggagcagttcaagaagctgaagagtctgttctaccgctccagtaacctgcag
tacttcaagaggctcattcagatcccacagttacctgagaacccacctaacttcctgcgg
gcgtcggcgttgtcggagcacatcagtccggtggtagtcatcccggctgagtcgtcctcc
cccgagacggaacacatggtggacctggtgacagaggacctggtggataccgacatcccc
gtccagccggctactgtggtagagcccaggttcgacgacctctttggcacgtccgccgcc
acggaccccttcaatttcaacaatcagaacgggatgcgcaaggacgacaaggaccgcctg
atcgagcagctgacacgggagatccaggccctcagggaggaactggagtccttcagattg
gagagtgggcgtctgtgccaggcgctacgcgggcgtgtcaatgagctagaggcggagcta
gcagagcagagccacctgagaatgcaggcgttgggagagagcgagttcctgagggcggag
cttgacgacctgcgccgggtcaaagaggacacggagaaagagcagcgaagcctcaccgag
atcgagaggaaagcggtggccaatgagcagcgctacgtcaagctgaaagagaagtacaca
gagctggtgcagagtcacgctgacctgctgaggaagaacgcggaggtgactcgtcagatg
acggtggcgcgggcagctcaggacgaggtggacagcgtgaggagagagatgcaggagaag
gtcaaggctgcccaggaggccgcggcgagacgggagcaggaacaggtggagcagctgcag
gagctgcagagggagctgatctccagcagggtggagctagacaccctgaaaagcaccatg
gcctcgtcccaacagtcgagtgaggagctcagttcgcagctctcgactgtggaatcggag
aaggtggagctagcgggatccttgttgaagaaagaggaggagcttgcaggcctgggggag
gagctagagcgtgttcagagcagcctggccagtgagagggaaagtggagtgaagactgcc
gaggccctacagaaccaactcaatgagaaggagagcagggagcaggccctggagagccag
ctggtggcagcccgctggtccaccctacagggggctgtggaggaggcagagaggatagtc
caggactcactggcccagcttgatgacccagcacatatcagctgcaccagctctgcagac
tacctggcgtccaggtgtcaggcatctctggactgtatggacagacttcactctgccaga
gacggctacctggcagacaacacaggtgtgtcggagctggtgcgggcagtgacccatctt
gcacacctggtgggcgacaccattgttcagggcagtgccacctctcacatggtgccagtg
gagcaagcggacgcgttgtcagacagtgtgaaggcgtgtggggctgaagccctggccctg
ctgggtcagatgaaggagcaggaaagcctggctacggcagacagcgcaacgttgagggca
gcgctggatggcatcctggccaccgcagagaaactgcgtcctcggggtctggagctgcag
cagggggagctgggagatctggtggagcaggaaatggctgccacatcagccgccgtggag
tcagcagccgccaggatagaggatatgctcaacaagtcgcgtgcagtcgacacaggggtt
aagatggaggtcaacgagaggatcctggcctcctgtacagacctgatgcaggccatcaaa
gagctcgttctgtcttccaaagatctgcaaagggatattgtggatagtggcaggggggca
gcatccatgaaggagttctatgtcaagaactctcgctggactgaaggcctgatctcagcc
tccaaagccgtgggctggggtgccacggtaatggtagatgcagcagatctggtggtgcag
ggcaagggcaagtacgaggagctgatggtgtgttcgcatgagattgcagccagcactgca
caactggtggccgcatccaaggtgaaggcagacaaagacaacgccaacctgggccgcctg
aagctggcatccaaaggggtcacacaggccaccgccggagttgtagcctccaccaagtcc
gggaagtcccagatcgaggagaaagacaccatggatttctccagtatgaccctcactcag
atcaagaggcaggagatggactcacaggtttcggttctagagctggagacaaagctgcag
aaggagcgagagcgtctaggagagctaaggaagaagcactatgagctggccggggtggcc
gagggctggggggaggaggacgaaggtacaggttga
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integrated database retrieval system
