Oncorhynchus tshawytscha (Chinook salmon): 112266911
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Entry
112266911 CDS
T05605
Name
(RefSeq) dynein assembly factor with WDR repeat domains 1 isoform X1
KO
K19760
dynein assembly factor with WDR repeat domains 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112266911
04812 Cytoskeleton proteins [BR:
otw04812
]
112266911
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Dynein assembly factors
112266911
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
112266911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WD40_like
PROPPIN
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
CEP19
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
112266911
NCBI-ProteinID:
XP_024300607
LinkDB
All DBs
Position
LG14:complement(27586728..27600346)
Genome browser
AA seq
415 aa
AA seq
DB search
MKLKRFLLRYYPPGIILEYEKGGALKTKSIDLLDLSPETDTEELISAIRKSEPLITASRV
DQVKLLIVRLQEKLGQQDNRRFCLFKALQAHILPLTNVAFNKSGSSFITGSYDRTCKIWD
TASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCRLWSVETGKCFHTFRGHTAEI
VCLAFNPQSTLVATGSMDTTAKLWDIQTGEEVSTLTGHSAEIISLSFNTVGDQLVTGSFD
HTVSLWDVPSGRRVHTLIGHRGEISSVQFNWDCSLIITGSMDKSCRVWEAASGKCMATLA
GHEDEVLDVCFDYTGQLIATASADGTARVYSAVSYQCISRLESHEGEISKICFNAQGSRV
LTASADKTARLWDVQSGVCLQVLEGHTDEIFSSAFNYEGDTIITGSKDNTCRIWR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaacgattccttctcagatattatccaccaggtatcatcctggaatatgag
aaaggaggagctctgaagactaaatccatcgatctgttggatttgtctccggagactgac
accgaggagttaatatcagcgatcaggaaatcggagccactgatcacagcatcacgcgtc
gaccaagtcaaactcttgatcgtcagactgcaggagaaactgggtcagcaggacaatcgc
agattctgcctcttcaaggcgctgcaggcgcacatactgccactgacaaacgttgccttc
aataaatcagggtcgagttttataactgggagctatgacaggacatgtaaaatatgggac
acggcgtcaggcgaggagctgcacacactggagggccacaggaacgtggtgtatgccatc
gccttcaacaacccctatggggacaagattgccactgggtcctttgataagacctgcagg
ctgtggagtgtagagacgggcaaatgtttccacaccttccgaggacacactgctgaaata
gtgtgtttggcgtttaaccctcaaagtaccttggtggccacgggtagcatggacactacg
gccaagctatgggacatccagactggagaggaggtgtccacactgacaggccactcagca
gagatcatctccttgtcatttaacacagtgggtgaccagctagtcactggctcctttgac
cacactgtttctctgtgggatgttccatctgggaggcgtgtccacacactgataggccac
agaggggagatcagcagtgttcagtttaactgggactgctccctcatcatcaccggctcc
atggacaaaagttgtagggtgtgggaggcagcgagtgggaagtgtatggccacactagca
ggccatgaagacgaggtgctggatgtgtgtttcgactacaccggtcaactcatagccacc
gcctcggctgacggcacagcgagagtgtacagcgctgtcagctaccagtgcatctccaga
ctggagagccatgagggagagatctccaagatctgttttaacgctcagggcagtagagtt
ctgacggccagcgctgacaagacggctcgcctgtgggacgtccagtctggcgtctgtctg
caggtcctcgagggacacacggacgagatcttctcctctgccttcaactacgagggtgac
accatcatcacaggcagcaaggacaacacctgtcgcatctggcgctga
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