KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112266949
Entry
112266949         CDS       T05605                                 
Name
(RefSeq) charged multivesicular body protein 4b
  KO
K12194  charged multivesicular body protein 4A/B
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250  Viral life cycle - HIV-1
otw04144  Endocytosis
otw04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112266949
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112266949
  09143 Cell growth and death
   04217 Necroptosis
    112266949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112266949
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112266949
Membrane trafficking [BR:otw04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    112266949
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112266949
  Exosomal proteins of other body fluids (saliva and urine)
   112266949
  Exosomal proteins of colorectal cancer cells
   112266949
SSDB
Motif
Pfam: Snf7 SYF2 DUF6437
Other DBs
NCBI-GeneID: 112266949
NCBI-ProteinID: XP_024300686
LinkDB
Position
LG02:54926168..54941251
AA seq 220 aa
MSLFGKLFGTGGKGDKMTSPQEAIQRLRDTEEMLTKKQEFLEKKIDQELLTAKKNGTKNK
RAALQALKRKKRYEQQLGQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHEN
MDIDKVDDLMQDITEQQELAQEISDAISKPVGFGEEFDEDDLLAELEELEQEELDKNLLE
ITGTDNVPLPNVPSTSLPVRPAAKEEDDDDMKDLEAWAAN
NT seq 663 nt   +upstreamnt  +downstreamnt
atgtctttgttcgggaagttatttggcactggaggtaaaggggataaaatgactagccct
caggaggcgattcagcgacttcgagacacagaggaaatgttgacgaagaaacaggaattt
ttggagaaaaagattgaccaggaactcctcactgcgaaaaagaatggcacaaaaaacaaa
agggctgctctgcaggccttgaaacggaaaaagcggtacgagcaacagttgggccagatc
gacggcacgctgtccaccattgaattccagagggaagcgctagagaacgccaacaccaac
accgaagtgctgaagaacatgggctttgctgccaaggccatgaaggcagcccatgaaaac
atggacatagacaaagtggatgacttaatgcaggacatcacagagcagcaggagctggct
caagaaatctctgatgctatttctaaacctgtagggttcggagaggaatttgatgaggat
gatctcttagcagaattggaagaactggaacaagaggaactagacaaaaacctcctggaa
atcactggcacagataatgtaccgctgccaaatgtgccctccacatccttacctgtaaga
ccagcagcaaaggaggaagatgatgacgacatgaaggatctggaggcatgggctgccaac
tag

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