KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112266992
Entry
112266992         CDS       T05605                                 
Name
(RefSeq) cullin-5
  KO
K10612  cullin 5
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112266992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112266992
   03400 DNA repair and recombination proteins [BR:otw03400]
    112266992
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     112266992
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112266992
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 PTPlike_phytase
Other DBs
NCBI-GeneID: 112266992
NCBI-ProteinID: XP_024300750
LinkDB
Position
LG14:30622389..30632082
AA seq 787 aa
MAQVGGNMATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQEAVTKQQWFDLFSDVHAVCLW
DDKGPAKIHQALKEDILDFIKQAQNRVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQ
LEITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKSRLQDSAMKLVHAERLGEAFD
SQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKY
ADTKLREEEKRAVRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKL
HLMFSLMDKVPSGIEPMLKDLEDHIMNAGLADMVAAAETITSDSEKYVEQLLMLFNRFSK
LVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCD
MLLRKTTLSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIE
ENMVEWLREVGMPADYVNKLARMFQDIKVSDDLNQVFKEMHKHNKLALPADSVNIKILNA
GAWSRSSEKVFVSLPTELEDLIPEVEDFYKRNHSGRKLHWHHLMSNGIITFKNEMGHYDL
EVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPS
VSSPKDFTDSTLFFINQDFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRIL
RTQEAIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDI
NTFIYMA
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggcacaagttggaggaaacatggcgacgtcgaatttgttaaagaataaaggctccttg
cagtttgaggacaagtgggacctgatgaggcccatcgttctcaagctactgagacaggag
gctgtcaccaagcagcagtggtttgacctcttctcagacgtccatgctgtgtgtctgtgg
gatgataagggcccagctaagatccaccaggcgctcaaagaagacatcctagacttcatc
aaacaagctcagaatcgtgtgttgagtcatcaggatgacacagcgttactgaaggcctac
attgtggagtggcgaaagttcttcacacagtgtgacatcctgcccaaaccgttctgtcag
ctggagatcacactgatggggaagcagggcagcaacaagaagtctaacgttgaggacagc
atcgtacgcaagttgatgttggacacatggaacgagtcgatcttctccaacataaaaagc
cgtcttcaggacagtgctatgaagctggttcacgctgagaggctgggagaggcttttgac
tcccagctggttataggagtacgagaatcttacgtcaacctgtgctctaaccctgaagac
aagctccagatctacagagataactttgagaaggcctacctggactcaactgagaggttt
tatagaacacaggccccatcatacctacagcagaatggagtccagaactacatgaaatat
gcagacacaaagctaagggaagaggagaagagggcagttcgatacctcgagactcgtcgt
gaatgtaactctgtccaagcactgatggaatgttgtgtgaacgctctggtgacgtcgttt
aaagaaaccatcctggccgaatgtcccggcatgatcaaacgcaacgagacagacaagctc
cacctgatgttttccctgatggataaggttcctagtgggatagagcccatgctgaaagat
ctggaggatcacatcatgaacgctgggctggctgatatggtggctgctgcagagactatc
acttctgactctgagaagtacgtggagcagctgctgatgttgtttaaccgtttcagtaaa
ctggtgaaggaggcttttcaggacgaccctcgattcctcactgccagagacaaggcctac
aaagctgtagtgaacgatgccaccatctttaaactggagctgcccctcaaacagaaaggg
gtaggtctgaaaacccagccagagtcgaagtgtccagagctgctagctaactactgtgac
atgctgctgaggaaaaccaccctgagcaagaaactcacctcagaggagatagaactcaaa
ctcaaagaagtgttgctggtgttgaagtatgttcagaataaggatgtgtttatgaggtac
cataaagcccacctgaccagaagactgatcctggacatctcagctgacagcgagatagaa
gagaacatggtggagtggctcagggaggtggggatgcctgcagactatgtgaataagctg
gccaggatgttccaggacattaaagtatcggatgatctcaaccaggtcttcaaggagatg
cacaaacacaacaagctggctctaccagctgacagtgtgaatataaagatcctgaatgcg
ggggcgtggtcgaggagcagtgagaaggtgtttgtatctctgcctactgagctggaggat
ctgatcccagaggtagaagacttctacaagaggaaccacagcgggaggaaactacactgg
caccacctcatgtccaatggcattatcaccttcaagaatgaaatgggtcattatgacctt
gaggtcacgacctttcagctggctgtcctattcgcctggaaccagcggccgcgggagcga
atcagctttgagaaccttaaattggctaccgagctgcctgatgctgagctacgacgcaca
ctctggtctctggtagcattccctaagctgaagagacaggttttgtcctatgagccttca
gtctcctcccctaaagacttcactgacagcaccctgttcttcatcaaccaggacttttct
ctcattaaaaactccaaggtccagaaaagaggcaagattaatctgattggtcgattgcag
ctgaccacggagcgaatgagagaggaggagaacgagggcattgtccagctgagaatatta
agaacccaggaggccatcatccagattatgaagatgaggaagaggatcagtaatgcccag
ctacagacagagctggtagagatccttaagaacatgttcctgccccagaaaaagatgatc
aaggaacagattgagtggctcatcgaacacaaatacatcaaacgggacgagactgacatc
aacacctttatctacatggcatag

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