Oncorhynchus tshawytscha (Chinook salmon): 112267019
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Entry
112267019 CDS
T05605
Name
(RefSeq) RILP-like protein 1
KO
K13883
Rab-interacting lysosomal protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112267019
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112267019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267019
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112267019
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH1
RILP
Fib_alpha
Sec2p
SlyX
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
112267019
NCBI-ProteinID:
XP_042153296
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All DBs
Position
LG14:32088958..32108408
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AA seq
445 aa
AA seq
DB search
MHTGANMENDCDINDQKQDVKKTGCCFERTCSALTVDDVYEMAKLIGSEVEKLIDSYGKE
SATVLLPKIVKVLEFLESFASRNNAHKSKEEELLKAFETLHVQKQKKTRSVKEYDESRKI
EIQREVQQQEEAEKQSSRCEELQAQVLHLQTEIQELQSCLRGNHAQEDRVQRQEREVMLK
LKEVVDKQRDELRAKVQQIASMSKEVEALQEQLERFMKMNGELRHKQSIVTAQVKNAVER
KADMEADLREKQKEIECLTTQLEKANAAVGTASPCRTEWDLTGKLVIDLKDPNRPCFTKQ
EIREMLTERNELKANLFLVQEELSYYQREILNDERCPGFLPEAVRSAIKKQKTVIKAKML
GMPEDKCSSDEEKGPLFERRAETETERDSTHSKPHESRIRNLFGFLTRSGSNHSSRSPSE
NKAASSWEIIDDTKTTTETETRRSP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcacactggtgcaaacatggagaatgattgcgatattaacgatcaaaagcaagacgtc
aagaagaccgggtgttgttttgaaaggacatgttcagcattaactgtggatgatgtatac
gaaatggctaaattgattggctcggaagtggaaaaacttattgacagctacggtaaagag
agcgccacagtactgctgcctaaaatagtcaaagttctagagtttttggagagcttcgcc
tcgcggaacaatgcacacaagtcaaaagaagaagaattactcaaagcatttgaaacgcta
catgtacagaaacagaagaagacaagatctgtgaaagaatacgacgaaagcagaaagatt
gaaatacagcgggaggtgcagcagcaggaggaggcagagaagcagagcagcaggtgcgag
gagctgcaggcccaagtgttacatctacagactgagattcaggagttacagagctgcctg
aggggcaaccatgcccaggaagaccgtgtacaacggcaggagcgggaggtgatgctgaaa
ctgaaggaagtggttgacaagcagagagatgagctgagggccaaagtacagcagatagcc
agcatgtctaaagaggtggaggcgctgcaggagcagttggagcgcttcatgaagatgaat
ggggagctgagacacaagcagagcatcgtcacggcccaggtgaagaatgctgtggagagg
aaggctgacatggaggcagacctcagagagaaacagaaagagatagaatgcctcaccacc
cagctggaaaaggccaacgctgctgtgggcacggccagtccatgtaggacagagtgggac
ctgacaggcaagctggtgatagaccttaaggaccccaacagaccctgtttcaccaagcag
gaaatcagagagatgctgacagagaggaacgagctcaaagccaacctgttcctggtgcag
gaggaactctcctactaccagagggagatcctgaatgatgagcggtgtccaggattcttg
ccggaggcagtacgttctgccataaagaaacagaaaactgtcatcaaggccaagatgctg
ggcatgccagaagacaaatgcagcagtgatgaggagaaaggccccctgtttgagaggaga
gcagagacagaaaccgagagagacagcacacacagcaaaccacatgagtctcgcatcagg
aacctctttggcttcctgactcgctccggcagcaaccacagcagccgtagtcccagtgaa
aacaaggctgcttcttcctgggaaatcatcgacgacaccaagaccaccacggagacagaa
accagacgatcaccatga
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