Oncorhynchus tshawytscha (Chinook salmon): 112267033
Help
Entry
112267033 CDS
T05605
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267033
Membrane trafficking [BR:
otw04131
]
Protein recycling
Others
EARP complex
112267033
Endosome - Golgi transport
Tethering complex
GARP complex
112267033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
hAT-like_RNase-H
Laminin_II
FBF1
PsaD
NBD94
Sec8_N
Motif
Other DBs
NCBI-GeneID:
112267033
NCBI-ProteinID:
XP_024300806
LinkDB
All DBs
Position
LG14:complement(32556791..32588543)
Genome browser
AA seq
831 aa
AA seq
DB search
MMMEEEELEFSEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLA
NIDEVVNKIRLKIRRLDDNIRMVVRGQTNVGQDGRQALAEAQVAIGQLFGKIKDIKDKAE
KSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLARGVDSLEAMTRRRQYGEVANLLQ
GVVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPAQGSKRAGGPSNVLR
DACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYE
EKYGRMFPEEWCMTERIAVEFCHITRTELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLA
KRFSGCTLTDGPGVKRPEPPLESTNPFLEDEVGDDGSEMEEDLDRPKKHKAPDNPFHGII
SKCFEPHLYVYIESQDKNLGEMIDRFVSDFRAQGPPKAGTEDGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSNSGGLTIKSLLQEKEGSEA
AKFNVEELCLICSILSTAEYCLATTQQLEEKLKEKVDKTLVERINLTGEMDTFSNVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRGNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKTLDMKGLKRS
EQSSMLELFRQRLPTPPSGADGGPSFSFSTPTPEQENSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggaggaagaattggaattttcggaggatttggaggctattttgcatctt
actccagaggtgcagttggccatcgagcaggttttccccagtcaagacccattggacaga
gcagattttaatgctgtggaatacatcaatacattgtttcccactgagcagtcactggca
aatatagatgaagtggtcaacaagatccgtctgaagattcggcgtctggatgataacatc
aggatggtggtgagaggtcagaccaacgtgggccaggatggcagacaggcactggcagag
gcccaggtagccatcggccagctctttggcaaaatcaaagacattaaggacaaggctgag
aaatctgagcaaatggtcaaagagataacgcgggacatcaaacagctggaccatgctaag
cgtcacctgaccacctccatcaccaccctcaaccacctgcacatgctggccaggggcgtt
gactctctagaggccatgacgaggaggaggcagtatggcgaggtggctaacctgctacag
ggggtggtcaacgtgctggaacacttccacaaatacatgggcatccctcagatcagacag
ctctcagagagggtgaaagcagcccaaagtgagctggggactcagatcctggcagacttc
gaagaggccttccccgctcaggggtcaaagagagcagggggacccagtaacgttctgagg
gatgcctgtctggtggccaacgtcttggaccctcgcatcaaacaggagatcatcaagaag
ttcatcagacagcacctctctgagtacatggtgctcttccaggagaaccaggatgtagct
tggctggataagatcgaccggcgctacgcctggattaagcgtcagctggtggactatgag
gagaagtacggacgcatgtttcctgaagagtggtgtatgaccgaacgcatcgctgtagag
ttctgccacatcaccaggacagagctggccaaagtaatgcggacgcgggccaaagagatt
gaggtcaagctgcttctgtttgccattcagaggaccaccaacttcgaggggctgctcgcc
aagcgcttctctgggtgcaccctcaccgacgggcccggggtgaaaaggcctgagccacca
ctggagtccaccaaccctttcctggaggacgaggttggagatgatggttcagagatggag
gaggatctggataggcccaagaagcacaaggctcctgacaaccccttccatggcatcatt
tccaagtgctttgagcctcacctctatgtctacatcgagtctcaggacaagaacctgggg
gagatgattgaccgttttgtgtcagacttccgggcgcagggcccccctaaggcgggcacg
gaggacgggggagcagtgctgcccagctgtgctgacctgtttgtctactataagaagtgc
atggtgcagtgctcccagctcagcacaggggaacctatgatcgccctcaccaccatcttc
cagaagtacctcagagagtatgcctggaagatactgtctggaaacctgcccaagactagc
agtaatagtggaggactgaccatcaagagtctactgcaggagaaggagggttcggaggct
gctaagttcaatgtagaggagctgtgtctcatctgtagcatcctcagtactgcagagtac
tgtctagccaccacacagcagttagaggagaagctgaaggagaaggtggataagactctg
gtggagagaatcaacctgactggagagatggacaccttcagcaatgtgatttccaacagt
atccagttgcttgttcaggacctggacgctgcctgtgatcctgctctcactgccatgagc
aagatgccatggcagagtgtagaacatgtaggtgaccaaagtccctacgtgacgtccgtc
atcatgcacatcaaacagaacgtccccatcatcagagggaacctggcctccacacgaaaa
tacttcacccagttctgcatcaagttcaccaactcttttattcctaaattcatcaaccac
ttgttcaggtgtaagcctatcagcatggtgggggctgaacagctcctcctggacacccac
tccctgaagacagtgttgttggatctgccctctatagggtctcaagtggtccgcaaggct
ccagccagctacaccaagatagtcgtgaaggggatgacccgcgctgagatgatcctcaag
gtggtcatggccccccatgaaccctctgtggtgtttgtggataactacatcaagctcctc
gctgatggaaacccagagaccttccagaaaactctggatatgaaggggttgaagcgcagt
gagcagagcagcatgttggagctcttcagacagaggttacccactccaccctcaggggcc
gacggaggcccctctttctccttcagcacccccacccccgagcaggagaactcgcgcata
cgcaaactggagaagctcatcaaaaagagactataa
DBGET
integrated database retrieval system
