Oncorhynchus tshawytscha (Chinook salmon): 112267044
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Entry
112267044 CDS
T05605
Name
(RefSeq) septin-5-like isoform X1
KO
K16943
septin 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112267044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267044
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112267044
04812 Cytoskeleton proteins [BR:
otw04812
]
112267044
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
112267044
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Sperm associated proteins
112267044
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
112267044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AIG1
VapE-like_dom
Ras
ABC_tran
Dynamin_N
Roc
AAA_16
nSTAND1
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
112267044
NCBI-ProteinID:
XP_042153304
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All DBs
Position
LG14:complement(32848109..32933298)
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AA seq
546 aa
AA seq
DB search
MENSSSNNRFRTTMFNHDDEIAECTVAPVAMEDSDHEAHSSSDDLDSAPPSPDSTRDHHH
EPEQHSHHYKDDSEDSELENIMQQDPHHSGDHPRPPLGGYEHSPDLEHSHPVDREAEGGD
TPGTPTFLQPPTAGGRAQSDNQGVGRLHLGGCGMVDHYDMQSPLSPTRPKSPWGRFDPYD
FPEDQDKDYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYKDRKL
LNAEERITQTVEITKHTVDIEEKGVKLKLTIVDTPGFGDAVNNTECWKSVADYIDQQFEQ
YFRDESGLNRKNIQDNRVHCCLYFISPFGHGLRPLDVEFMKALHEKVNIVPILAKADTLT
PTEVKKKKFKIREEIQQYGIKIYQFPDCDSDEDEDFKQQDQELKDSIPFAVIGSNTVVEA
KGKRVRGRLYPWGIVEVENSAHCDFVKLRNMLVRTHMQDLKDVTRETHYENYRAHCIQSM
TRMVVKERNRNKLTRESGTDFPIPVIPSTTDTETEKLIREKDEELRRMQEMLTKIQEQMH
TQKEAY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattcgtcttccaacaaccggtttaggacaacaatgttcaaccacgatgatgag
attgcagagtgcactgtagccccagtagcaatggaggacagtgaccatgaggctcactca
tcatcagatgacctggactccgccccgccatcccctgacagcaccagggaccaccaccat
gagcccgaacagcactcacaccattacaaggatgattctgaagactctgagttggagaac
atcatgcaacaagacccccaccacagcggggaccaccctcgcccgcctctgggcggctat
gagcacagccccgacctggagcactcccacccggtggacagggaggcagagggtggcgac
acccccgggacgcccacctttttgcagccccccacggcgggtggcagggcccagtcagac
aaccagggcgtagggaggctgcatttgggtggatgtgggatggtggatcactatgacatg
cagtctcccctcagtcccaccaggcccaagagcccctggggccgctttgatccctacgac
tttccagaggaccaagacaaggactatgtgggctttgccacactgccaaaccaggtgcac
cgtaagtctgtcaagaagggctttgacttcaccctgatggtagcaggggagtctggtctg
ggcaagtccaccctggtcaacagcctcttcctcacagacctctacaaggacaggaagcta
ctcaacgctgaggagcggatcactcagacagtggagatcactaaacacacagtggacatt
gaggagaagggcgtcaagctgaagctcaccatcgtagacacccctggctttggagacgct
gtcaataacactgaatgctggaagtcagtggcggactacatcgaccagcagtttgagcag
tacttcagggacgagagtggactgaacaggaagaacatccaggataacagagttcactgc
tgcctctacttcatctctcccttcggacacggcctgaggcctctggatgtggagtttatg
aaggcccttcatgagaaggtcaacattgtgccaatcctggccaaggcagatacactcaca
cccaccgaggtcaagaaaaagaaattcaagatcagagaggagatccagcagtatggcatt
aagatctaccagttcccagactgtgactctgatgaggatgaggacttcaaacagcaggat
caggagctcaaggacagtataccgtttgcggtgatcggcagcaacacggtggtggaggcc
aaagggaagagggtccggggtcgtctttatccctggggcatcgtggaagtggagaactcg
gcgcactgtgactttgtgaagctgaggaacatgttggtgaggacacacatgcaggacctg
aaggatgtgacacgggagacacactatgagaactacagggctcactgcattcagagcatg
acccgcatggtggtgaaggaacgcaaccgcaataaactgaccagggagagcggcacagac
ttccccatccctgtgataccaagtaccacagacacagagacggagaagctaatccgagag
aaagacgaagagttgcggcgaatgcaagagatgctcacaaagatccaggaacagatgcac
acgcagaaggaggcctattaa
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