Oncorhynchus tshawytscha (Chinook salmon): 112267053
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Entry
112267053 CDS
T05605
Name
(RefSeq) claudin-3
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112267053
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112267053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112267053
04147 Exosome [BR:
otw04147
]
112267053
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112267053
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112267053
Exosomal proteins of colorectal cancer cells
112267053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
SPC25
DUF2232
Motif
Other DBs
NCBI-GeneID:
112267053
NCBI-ProteinID:
XP_024300874
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All DBs
Position
LG14:complement(33286006..33290795)
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AA seq
377 aa
AA seq
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MAVLGLEILGVTLAVLGWILSIVSCAMPMWRVSAFIGVNIITAQTMWEGIWMTCMVQSTG
QMQCKGYDSMLALSSDLQAARALTIISIVVGITGVLVAVVGAKCTNCVEDETAKAQVMIA
AVVAFIVASLTQLIPVSWSANRIIMDVYSPITPEALKRERITTMSAGLELVGIALCVLGW
IIAIVSCTLPMWRVTAFIGSNIVTAQIIWEGLWMTCVVQSTGQMQCKVYDSMLALSQDLQ
AARALTVISILLAILAVLIAIAGAKCTNCIEDEASKAKVMIISGVFFIVSGVMQLIPVSW
SANTIIRDFYNPLLTDAQRRELGAALYIGWGASALMILGGSLLCYSCPPRKYKPSQMAYS
APGSPPGGPGFQRKDYV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgttgggactagagatcttgggagtgaccctggctgtcctgggttggatatta
agcatcgtgtcctgcgccatgcccatgtggagggtgtccgctttcatcggggtcaacatc
atcacagctcagaccatgtgggagggcatctggatgacctgtatggtgcagagcacgggc
caaatgcagtgtaagggctacgactccatgctagccctcagctccgacctgcaggcagcc
cgagccctcacaatcatctctatagttgtgggcatcacgggggtgctggtggccgtggtg
ggggctaagtgtaccaactgtgttgaggacgagacggccaaggcccaggtgatgatcgca
gcggtggtggccttcatcgtagcatccctgacccagctgatccctgtgtcctggtcagcc
aacagaatcatcatggatgtctatagtcccatcactcctgaggctctgaaaagggagaga
attaccaccatgtctgcagggttggagttagtggggatcgctctatgcgtattaggatgg
atcattgccatcgtgtcctgcaccctgcccatgtggcgagtaacggccttcatcggcagc
aacatcgtcacggctcagatcatctgggagggtctgtggatgacctgtgtggtccagagc
acaggccagatgcagtgtaaggtctatgactccatgctggctctctcccaggacctccag
gccgccagggctctcacagtcatctccatcctcctggccatcctggccgtgctcatcgcc
atcgccggcgccaagtgcaccaactgcatcgaggacgaggcatccaaagctaaagtcatg
ataatctctggggtgttcttcatcgtgtcaggagtcatgcagctgatcccagtgtcctgg
tcggccaacactatcatcagggacttttacaacccgctgctgactgatgcacagcgcaga
gagctaggggcagcgctctacattggctggggggcctcagccctcatgatcctcggggga
agcctcctctgctactcctgtccccctaggaagtacaagccctcacagatggcatactct
gccccaggctctcccccaggtgggcctgggttccagagaaaagactatgtgtga
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