Oncorhynchus tshawytscha (Chinook salmon): 112267074
Help
Entry
112267074 CDS
T05605
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112267074
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112267074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112267074
04090 CD molecules [BR:
otw04090
]
112267074
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Nectin family
112267074
CD molecules [BR:
otw04090
]
Proteins
112267074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
V-set
ig
Ig_2
I-set
C1-set
Motif
Other DBs
NCBI-GeneID:
112267074
NCBI-ProteinID:
XP_024300902
LinkDB
All DBs
Position
LG14:complement(33746638..33820906)
Genome browser
AA seq
558 aa
AA seq
DB search
MAKRLLLDYHKTLPPNGLQAATVLLLIYGFTCVSSNAVLVPGRVSAVLGKNITLGCRVEV
GTNLSLTQSSWERRLPSGTITLAVFNPQFGISISPDYARRLSFLNPSVHDATIVLEGVGF
QDIGSYTCKVATFPLGNTQASITVNILVEPKVYVSAGSMALVDGGNESVAATCIAERGRP
AAEVSWETELFGRSEVQTQDEPNGTYSTQVHYVLEPRRHSQGHTLTCVVRHPALQTEFRI
PYVLDVQFAPEVTVVGYDQNWFVGQENVKLDCGAKANPPAHHFSWTRLDGPMPDGVDIVN
NTFSFTRPLERNDSGLYRCEVYNDIGPRSHDVHVWIQDPPPTTAPVPTTSTPLFLHTSDT
SMAPNKRRGASGHFTSPTLASLSDSSLGTIVGGAVGGVLLLGLLLILGGACFMRQRRTFR
GDYYTKQYLGPSDMQKESQLDVLQPHELQEVYGDRHNSTCKDSQELKPKPGLGGDIIYPN
DIKDKEDWGDGHRGLREGSYYPVENHNNIHHPKGPLVHTPTVTNGSPYLPEDCYDNGTDS
EYVSHMDGSVISRREWYV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagattgctactcgattaccacaagactctgccgcccaatggactgcaagcc
gccacagttttgcttctcatttatgggtttacctgtgtgagtagtaatgcggtgctggtc
ccagggagggtgagtgctgtgctggggaagaacattactctgggctgcagggtggaggtg
ggcaccaacctcagcctcacccagagctcctgggagcgtcgcctgccctcaggcaccatc
accctggccgtcttcaacccccagtttggcatctccatctccccagactacgccaggcgc
ctgtccttcctgaacccctccgtgcacgatgccaccatcgtcctggaaggcgtgggtttt
caggacattgggtcttacacgtgtaaagtggcgactttcccgttgggaaacacgcaggca
tccatcaccgtcaatatactcgtggagcccaaggtttacgtctctgccggctcaatggcc
ctggtggatggtggtaatgagtcggtggcagccacctgcatagcggagcgcggccggcct
gcagccgaggtgtcctgggagactgagctgtttggccgctctgaggtccagacgcaggac
gagcccaacggcacctattccacccaggtgcactatgtgttggagccacggagacactcc
cagggccacaccctcacctgcgtggtgcgccacccggccctgcagactgagttcaggata
ccctacgtgcttgatgtgcagtttgctcctgaggtgacggtggtgggatatgatcagaat
tggtttgttggtcaggagaatgtgaagctggactgtggagccaaagcaaacccacctgcc
caccacttctcctggaccaggttggatgggccgatgcctgacggtgtggatatagtgaac
aacacttttagtttcactcgtcctctggagagaaatgactctggactgtacaggtgtgag
gtgtacaacgacatcggtccacgcagtcatgacgttcacgtctggatacaagatcctccc
cccaccacggcaccagtccccaccacctctactcccctcttcctgcacaccagtgacacc
agcatggcccccaacaagcggcgaggagcgagcggccacttcacatcccccaccttggcc
tccctgtcagacagcagcctgggtaccatagtgggcggggctgtgggcggggtcctgctc
ctggggttgctgctgatcctgggcggagcttgcttcatgcgccagcggaggaccttcagg
ggtgactactacaccaaacagtacctgggcccctccgacatgcagaaggagtcccagctg
gacgtgctccagccccacgagctgcaggaggtctacggggacaggcacaactctacctgc
aaggacagccaggagctgaaacccaagccgggactgggaggggacatcatttaccccaat
gacatcaaggacaaggaggactggggcgacggccacaggggcctccgggagggcagctac
taccctgttgaaaaccacaacaacatccaccaccccaaagggccgctcgttcacactccc
actgtgaccaacggctccccctacctgccggaggactgctatgacaacggcacagacagc
gagtatgtgtcccacatggatgggtctgtgatctcacgcagagagtggtatgtctga
DBGET
integrated database retrieval system
