Oncorhynchus tshawytscha (Chinook salmon): 112267085
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Entry
112267085 CDS
T05605
Name
(RefSeq) phospholipid transfer protein-like
KO
K08761
phospholipid transfer protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
112267085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112267085
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112267085
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
JHBP
Motif
Other DBs
NCBI-GeneID:
112267085
NCBI-ProteinID:
XP_024300919
LinkDB
All DBs
Position
LG02:53907733..53924316
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AA seq
489 aa
AA seq
DB search
MMASCMVSILFLFPLIATMSAEEPPGCKIRITNRGLEMLKYETQKFVVEELSNITMPEMK
GKEGHFQYTIKEVKINELNLTYADLAFQPGLGLLFKVQNSSIALSFQRHILYWLFYDTGA
INASAEGVNIHTVLHTTRDELGRLKISNITCDASIAKMKMKFTGTLGRVYDFLATFLTTG
MRFLLNQQICPVMNHAGLVLINTLLETIPVRTEVDNYVGIDYSLLSDPLVTSRSLDMDFR
GMFFELGNESNTLVNSAINPIVREYDRMVYLALSEYFFDSGLYSYYKAGIFQMNITNEHM
PKDLEMLLRTTYFGIIMMINPALVEYPISLQLELNSAPKTTVKTSGVTVAITAIVTVMVL
PPGKAPVQLSSMTMEAKFNAKVSMKGKRLAVHADLRRFKIYSNQSALESLALIPLQVPLK
TMLQISIVPIINNWTKRGVAIPLADGMDFIEEVVEYHNGYLIIGANLHFSKGLREMIERK
IQADAENAI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcctgtatggtgtctatcctcttcctgttccctctaatcgccaccatgtca
gcagaagaaccgccaggctgcaagatccggatcactaacagggggctcgaaatgttgaag
tacgagacgcagaagtttgtggttgaggaactgagcaacatcaccatgccagagatgaag
ggcaaagagggccacttccagtacaccatcaaagaggtgaagataaatgagctgaacctg
acctatgctgacctggccttccagcctggcctaggactgctcttcaaggtgcagaactcc
tccatcgctctcagcttccagagacacatcttatactggttattctatgacactggagcc
atcaatgcctctgcagaaggtgtgaacatccacactgtcctgcacacgaccagagatgag
ttgggacgcctcaagatctccaacatcacctgcgatgcctccatcgccaaaatgaaaatg
aagttcactggcaccttgggtagggtgtatgacttcctggcgacttttttgactacagga
atgcgcttccttctgaaccagcagatctgccctgtcatgaaccacgctggtttggttcta
atcaacactttgttggagacaattccagtgcgaacagaagtagacaactatgtggggatt
gactactccctcctcagtgaccccttggtgacttcaaggagtcttgacatggatttcagg
ggcatgttctttgagctcgggaacgagagcaacaccttggtgaactctgccatcaaccca
attgtgagagagtacgaccgcatggtgtacctggctctgtccgagtacttctttgacagt
gggttgtactcctattataaagctggcatattccaaatgaatatcaccaacgagcacatg
ccaaaggatctggagatgctccttaggacaacatattttggcatcattatgatgattaac
ccagccctggtggaataccctatctccctgcaactggagttgaactctgcccccaagaca
actgtcaagacctccggggtcaccgtggccatcactgccatcgtcacggtgatggtgcta
ccgcccggcaaggcgcctgttcagctcagcagcatgaccatggaggccaaattcaatgcc
aaggtgtccatgaagggcaagagactggctgttcacgcagacttgaggaggtttaaaatc
tactccaaccagtctgctttggaatcactggcgcttattcccttacaagtccccctcaag
actatgctgcagatctcaatagtacccataatcaataactggaccaagagaggcgtcgct
atccctctcgcagatggtatggacttcatagaggaagtggtggagtatcataacggttac
ctcatcattggggcaaacctacatttcagcaagggcctaagggagatgatcgagaggaaa
atccaggctgatgccgagaacgccatctaa
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