Oncorhynchus tshawytscha (Chinook salmon): 112267089
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Entry
112267089 CDS
T05605
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112267089
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112267089
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112267089
NCBI-ProteinID:
XP_024300923
UniProt:
A0A8C8BYR6
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Position
LG14:complement(34361479..34381021)
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AA seq
581 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPNGFGVKLENLHMSPPSSKI
NGNDSDSKPVFLTLSNGHGKGKLSGDEGSEDGDDFDTPPILKELQSLNTEEAAEQRAEVD
RILAEDPWRAARIIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTW
YVRKQREVLRQFNQAVQGSVNNMTDKGSQDQVLFFFPEFNPPGQGMGQQGEELGSEPSCK
KMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSN
LVTEVRVYNWFANRRKEEAFRQKLAMDAYPIPIHSMNPLLSHSHSSPHHHSSQTNASPPS
KMPVRYSQQGPSEVSSSTTINHHGSMSTSQSVLQQVSPGGLDPSHSLLSPDAKMMSASGG
GLPPVSTLTNIHSSHHTHQQTQNLIMPLSGVMTIAQSLNTPQSQSVPVINSVAGSLAALQ
PVQFSQQLHSPHQHGLMQQSPSQQPFMATVTHSHSQYLPLMYPHKQEPTQYSHQSRFPSA
MVVTDANSLSTLSSMSSSKQDSTVNKMVQLGGLSWCPLQAW
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaaaatggtgtccaagttgacatctctccaacaggagctcttgagcgccttg
ttagattccggagttaccaaagatgttctgatccaagcattggacgatatggatcctagc
ccgaatggctttggagttaagttggagaatctacacatgtctccgccaagttctaaaatc
aacggaaatgattcggattcgaagccggtatttctaacgttgagcaacgggcacggtaag
ggcaaactgtcgggagacgaggggtccgaggacggagatgatttcgataccccaccgata
ctaaaagaactccagtcgcttaacacggaggaagcagcggagcagagggcagaagttgac
cgaatattagctgaggacccgtggcgtgccgcccgcataattaaaggctacatgcaacag
cacaacataccacagcgcgaggtggtggacgtaaccggactaaatcagtctcacctctca
cagcacctcaacaaaggcacgcccatgaaaactcagaagcgagcggcgctctacacctgg
tatgtcaggaaacagcgggaagttctaagacaattcaaccaggcagtgcaaggttctgtc
aacaacatgactgacaaaggcagtcaggatcaggtgctgtttttcttcccagagttcaac
cctcctggtcagggtatggggcagcaaggggaggagctgggctctgaaccctcctgcaag
aaaatgagacggaaccgtttcaaatgggggcctgcatcccaacagatcctctaccaggcc
tatgaaagacagaagaaccccagcaaagaggagcgagaggctctggtggaggagtgcaac
agggctgagtgtctccagagaggggtgtctccgtctaaagctcatgggctgggctctaac
ctggtcactgaggtacgggtctataactggtttgccaacaggcgtaaggaggaggccttc
cgtcagaagctggcaatggacgcctaccccatacccatccacagcatgaaccctctcctg
tctcacagccacagctctccacaccaccacagctcccagaccaacgcatccccccctagt
aagatgccagtgcggtacagccaacagggacccagtgaggtcagctcctcgacgaccatc
aaccaccatggcagcatgtcgacgagccagtcggtgttacagcaggtgtctccgggtggc
ttggaccccagccacagtctgctgtcacctgatgccaagatgatgtctgcgtcaggtgga
ggcctgccacctgtgagcacgctgaccaacatccacagctcccaccatacacaccagcag
acacaaaacctcatcatgcctctctctggagtcatgaccattgcacagagtctgaacacg
ccgcagtcccagtcggtgccagtgatcaacagcgtggcggggagccttgcagctctgcag
ccggtgcagttctcccagcagctccacagtccccaccagcatggcctgatgcagcagtcc
cccagccagcagcctttcatggcaaccgtgactcactcacacagtcagtacctgcctctt
atgtaccctcacaagcaggagcccacgcaatattcccaccagtcacggtttccctcagcc
atggtggtgacagacgccaacagcctcagtactctcagctccatgtcatccagcaaacaa
gattctaccgtaaacaagatggtgcaactggggggtctctcctggtgtcctcttcaagcc
tggtga
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