Oncorhynchus tshawytscha (Chinook salmon): 112267129
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Entry
112267129 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 32 isoform X1
KO
K20647
Rho GTPase-activating protein 32
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267129
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112267129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
SH3_2
SH3_9
SH3_1
PX
Motif
Other DBs
NCBI-GeneID:
112267129
NCBI-ProteinID:
XP_024301004
LinkDB
All DBs
Position
LG14:complement(36368700..36416506)
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AA seq
1708 aa
AA seq
DB search
MEKQTFSMMEAGCGVAAVIGNAASGPQGKPGSGDVLEGAMSLCITPDEDKNQPDPYKSTT
PTDKSPQGSTMATVRNDELTELPVEPEPTLRLCISTASMKVKNVKKLTFPRGHFPRLAEC
AHFHYETVDFGTVQLSFAEEQTEGQKACLDSKEPLYLVQICCQSRSWLVKRSYEDFRVLD
KHLHLCIYDRRFSKLNELPRIDYLKDTVEEITKMLAAYLSHLSAIADNKINCGPVLTWME
IDNKGNRMLVAEESSINVPAIAAAHVIKRYIAQATDELTFEVGDIVSVIDMPPKEDTGWW
RGKHGFQVGFFPCDCVELISDRIPTCVSSSVPKPVCKKHGKLVTFLRSFMKSRPPPQKLR
QRGILRERVFGCDLGEHLLNSEHDVPQVIKCCTEFIERHGVVDGMYRLSGISSNIQKLRH
EFDSEEIPDLSRDVFKQDIHSVGSLCKLYFRELPNPLLTYQLYERFSEAVSAATDEERLV
KIHNVIQQLPPPHYRTLEFLMRHLSQLATFSPITNMHTKNLAIVWAPNLLRSKQIESACF
SGTAAFMEVRIQSVVVEFILNNTESLFSRKVNAHNRESTGTSTLSRPKSLLVCSPSTKLL
SLEEAQARTQAQLGSPVPTPVLSHSEYIEVGEGPGALMGKFHTVIALPTESKRAPGKVKK
SPVGSWRSFFHLGKSSSMTSKRKLKRHPSEPNEIKSIALPGGRGDSGTLRSTKSEESLTS
LHNLEREPQMYRLPRPHSTSDALSTAFRDDLCHARVKGDHYNNQVKEVHSGADGPAFDPA
VVFPPHQEDLDLDLCLPAPGMAFLDFDPMSFQCSPVSPPTAKSAPQHKASINCRKHVRGS
SESKPISLSLNKVLSDSQSPDISPVHRKRGEKKKVARVVSPVVETDVHTVCVSAPRCVSD
TQGGESSSPSPLDLCEAQLVSEEGSEARAPCRPPSPPSFTSTVTDSLASQNPPDAGTDGL
VNSVSVLPPHPLLTSAARRLALALAESAQKATLTSQRRDTQPPYPLQRQDTPHPLDRPPR
PSVLHLQPCSQDYGDLKVSSPATLLPMAGTPVESPCDRFPGHERKRAPEGQVAMSNFTPT
VSSLEAEALLPGSTEVRDQREGRDRPLGAVKTVHLQTVSSSYLSGGASPPIQSVCSIQSP
LAAAVLANTDSVNAYNYQTVLAEASMPGSVGEIPPHRPLPSLVNQYSSDGERAMREAEDV
YRHHRVNPAGQASGPPRPDYFLPHQAGPKSMYKPTSDSCYNTLGLRNYPSNSPQYSGQPQ
PREEYSSSGHHRSRGQWQRTEDRTLGYPGIRRARSFHAQQPIRIELADTLFYVQRPAVQE
KEYKRLLQSDVQPLQPYFENGCVQYRYSPYSDAVPLEESYYYVDPYRTSRIRHSQSYTMR
STKDCGHPGYHYRPSHNIPTAKRELFLESRDPERVIYKSWDHPEGCDRPVYQPIRQENRA
RQRPQGPIMSPYENLNPPLPQSDIRGRDISHTRSRSDPGNAWLLAIDRVDSQREVPAMSP
ISPGQQLSDTSDYIRHQRVHWPGEEPVPPRRESVTRRTQPKQGTPQRYQPQHCNVPMLLD
VKNVEQGEGGHSRGCDKDTVIMGNAANSYSAQLKPSIPRRPRSQSIKEPRYYHHVKSPVE
PDHPGSFSTQPHRRTQSTKAMPSHYNNLEGYYPAHKPKPSGSGKAMPGPFPGHGCMPPHS
HRLLSHGLGGHGAFLQTGHRPEAGVYAE
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaaacattcagtatgatggaggctggctgtggggttgccgcggtgatcggg
aatgctgcctcaggaccacagggaaaaccaggaagtggtgacgtccttgagggggccatg
tcactgtgtattacaccagatgaagacaagaaccagcctgatccatacaagagcactact
ccaacagataagtccccacaagggagcacaatggccacggtacggaatgatgagctcaca
gagcttcctgtcgagcctgagcccaccctgcgtttatgcatcagcacagccagcatgaag
gtcaaaaacgtgaagaagctgacattccccagaggtcattttcccaggctggctgagtgt
gcccacttccactatgagaccgttgactttggcactgtgcagctgtcctttgcagaggag
caaactgaggggcagaaggcttgtctggactccaaggagccactctacctggttcagatc
tgctgccagagtcggagctggttggtgaagcgctcctatgaagacttccgtgtgctagac
aaacacctccacctttgtatctatgaccgacgcttctccaaactcaatgagctgcctcgc
attgactatctgaaggacacagtagaggaaataaccaagatgttggcagcctacctgtcc
catctctcagccatcgctgataacaagatcaactgtggaccagtgctgacatggatggag
attgataacaagggcaatcgcatgctggtagctgaggagtcctccatcaatgttcctgcc
atcgccgcggcccacgttatcaaacgctacattgcccaggccacagacgagctgaccttt
gaggtaggggacattgtgtcagtcattgacatgcctcctaaagaggacactggctggtgg
agagggaaacatggttttcaggttggcttcttcccctgtgactgtgtggagctgatcagt
gacaggattcccacctgtgtgtccagctctgtgccaaaaccagtgtgtaagaagcatggg
aagctggtgacattcctgagaagcttcatgaagtcccgtccacccccccagaagctgagg
cagcgtgggatcctcagggagagggtgtttggctgtgacctgggggaacacctcctcaac
tcagaacatgatgtcccccaggtgataaaatgctgtactgagttcattgagagacatggt
gtcgtggacgggatgtacagactctctgggatctcctccaacatccagaaactgagacat
gagtttgactcggaggagatcccagacctcagtagagatgttttcaaacaggatatccac
tctgtagggtccctctgtaaactgtactttagagagctgcccaaccctctgctcacctac
cagctctatgagagattctcagaggctgtgtctgcagctactgatgaggagaggctggtg
aagatccacaacgtcatccagcagcttcctcctcctcactacaggactctggaattcctc
atgagacatttgtcccaactagccaccttcagccctattaccaacatgcacaccaagaac
ctggccatcgtctgggctccaaacttgctcaggtcaaagcagattgagtcggcctgtttt
agtggaaccgcagcctttatggaggtgcgtatccagtcagtggtggtggagttcatactg
aacaacacagagtcactcttcagccgcaaggtcaacgcccacaaccgggagagcacaggt
accagtaccctatccaggcccaagtctctgctggtgtgctctccctccactaagctccta
tctctggaggaagcccaggcccgtacccaggcccagttgggctcccctgttcctaccccc
gttctgtcccacagcgagtacatcgaggtgggggagggacccggggcactgatgggcaag
ttccacacagtcatcgcgctccccactgagagtaagagggctcctgggaaggtgaaaaag
tccccagtgggaagctggcgttcattcttccacctgggcaagtcatcctccatgacctcc
aaacgcaagctgaagcgtcaccccagcgaacccaatgagatcaagagcatcgcgctgcca
ggtggtagaggtgatagtgggacactgcgctccaccaaaagtgaagaatctctcacctct
ttgcacaatttggaaagggagccccagatgtaccgcctacctagaccacactccaccagc
gatgccctctccaccgcattcagggatgacctgtgtcatgctagggtcaaaggtgaccac
tacaataaccaggtcaaggaggtccatagtggtgctgatggtccagcctttgacccagct
gtcgtgttccctccacatcaggaggaccttgaccttgacctctgtcttccagcccctggc
atggcctttctggactttgaccccatgtccttccagtgcagcccagtgagcccaccaaca
gctaaatccgctcctcaacacaaagcaagcatcaactgtaggaagcatgtcaggggttcc
agtgaatcaaagcccatctccttgtccctcaataaagtcctcagtgactcccagtcccct
gacatcagcccagtccataggaaaagaggggagaaaaagaaagtggctcgggtcgtctcc
cctgtggtcgaaacagatgtgcacactgtgtgtgtgtctgccccacgctgtgtctcagat
acccaggggggtgaatcctcctccccttcacctctggatctgtgtgaggcccaactagtg
agtgaggaggggagtgaggctagggcaccctgccggccccccagcccaccaagcttcacc
tcaactgtcacagacagtctggcttcacaaaaccctccggatgcaggaacagatgggctt
gtgaattcagtgtctgtcctccctcctcaccctctgttgacgagtgctgcccgcaggctg
gccctggccctggctgagtctgcccagaaggccaccctgacctcccagaggagggacacc
cagcccccctatcctctccagagacaggacacccctcaccccctggacagacccccacga
ccctctgttctccacctccaaccctgctctcaggattacggtgacctcaaggtctcttct
ccagccaccctcttacccatggctggcacaccagttgagagtccttgtgaccgtttccct
ggccatgagagaaaacgggcccctgaaggacaagtggccatgagtaacttcactcccact
gtcagttccttagaggctgaagctctactgccgggcagcacagaggtgagggaccagagg
gaagggagagaccggcccctgggagctgtaaagactgtacatcttcagactgtgtcctcc
tcgtatctcagtggtggggcctcccctcccattcaatcagtctgctccattcagagcccg
ttagctgctgctgtccttgctaacactgactcagtcaatgcctataactatcagactgtt
cttgctgaggcatccatgccagggtctgtgggggagatccctccacatcgtcctctgcca
tccttagtcaatcagtacagctctgatggagagagagctatgagggaggctgaagatgtg
tacagacatcatcgggtcaatccagcaggacaggcatctggacctcctcggcctgactat
ttccttccccaccaggcagggcccaagagcatgtacaaacccacgtctgacagctgctac
aatactttaggcctccggaactacccctctaactccccccagtatagtggtcaaccccaa
cccagggaagagtacagctccagtggccaccacagatccaggggacaatggcagaggact
gaggatagaaccctgggctaccccggcatccgcagggcacgctccttccatgcccagcaa
cctattcgtattgaactggcagacaccctgttctacgtccaacgtccagctgtccaggaa
aaggagtacaaaaggctactccagtcagatgtccaacctctgcagccgtactttgagaat
ggctgtgttcagtaccgctacagtccctattcagacgcagtgcctctagaggagtcttac
tactatgtggacccttacaggacgagccgcatccgacacagtcagtcatacaccatgcgc
tctaccaaggattgtggacatcctggttaccactaccgtccctcacacaacatcccaacc
gcaaaaagagaactcttcttagagagcagggatccagagagagtcatttacaagtcctgg
gaccatccagagggttgtgacagacccgtctatcagccaatcaggcaagagaatagagcc
aggcagaggccccagggccctatcatgtctccttatgagaacctgaatcctcccctccca
cagagtgacatcaggggcagagatatcagtcacaccagaagcaggtcagacccaggtaat
gcctggctgctggccatcgacagagtggacagccaacgtgaagtacctgccatgtctcca
atctcgcctggtcagcagctttcagacactagtgattacatcaggcaccagagggttcat
tggccaggcgaggagccagtccctcccaggagagagagcgttaccaggagaacccagccc
aagcagggcaccccccaacgatatcagccacagcattgcaacgtccccatgctcctagat
gttaagaacgtggagcagggtgagggtggtcatagtagaggttgtgacaaggacacggta
attatgggcaacgctgctaacagctactctgcccaattaaaaccaagcatccccaggaga
ccacgatcacagagcatcaaagagcctcgttattaccaccatgtcaaatcacctgtggaa
ccagatcaccctgggtccttctccactcagccccacaggagaactcagagcaccaaggcc
atgccctctcattataataacctggaggggtactacccagctcacaagcccaaaccctca
ggatctggtaaggccatgccagggccgttccctggccacggctgcatgcccccacacagc
cacagactgctgtcacatggcctagggggccatggggcctttctgcagacaggccacagg
ccggaagctggagtctatgctgagtga
DBGET
integrated database retrieval system
