Oncorhynchus tshawytscha (Chinook salmon): 112267141
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Entry
112267141 CDS
T05605
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112267141
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112267141
04090 CD molecules [BR:
otw04090
]
112267141
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
ALCAM
112267141
CD molecules [BR:
otw04090
]
Proteins
112267141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
I-set
C2-set_2
V-set
Syndecan
DUF6773
DUF6377
Podoplanin
TMEM70
Motif
Other DBs
NCBI-GeneID:
112267141
NCBI-ProteinID:
XP_024301034
LinkDB
All DBs
Position
LG14:36882805..36944128
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AA seq
560 aa
AA seq
DB search
MHFSGCLCALLVALVYQVSGMDTVIGLYGETIEVPCNNGAPKPKDLFMTKWKYDDGDLLT
QLKDQDASVIATDKYKDRVSMAENSSLLIAAATLKDEKTFTCMVVAGADISEYPVKLLIH
KAPTGVEITALATELEIGKPTQLGQCSTSDANPAASITWFKNKKPLVADGKGIIISSKVK
VDEVTGLTTTSSILQYTAEKGDTAALFTCGALNTLSSPVSFTVTYPTERISLHVISKGPL
MEGANVTLKCKADGNPPPTSFNFHILGKVVKVENSDSYTVTDVTRESTGEYKCSIIDNAK
MEDSKNITINYLDMSLSPSGKVMKSFGEGLALTLQTHASGELKVSWTKDNGKLDSRPTFD
KLTYSDSGKYEVVVTMGPLIKKASFELVVEGVPVIRRVAKRRGEDGQHKVLTCEAEGSPK
PTVAWSVNGTSADESPYVNGKITHKLTIVPTVNLTVVCTVSNELGQDTRTINVSTLFEEV
RMDKQDSSDEGDTTKLVVGVIVGLLLATVVVGLAYWLYMKKSKQGSWKTGEKEDGSTEES
KKLEEKIEEKLEENSQKVEV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttccggctgtctgtgtgccctcctcgtcgcgcttgtctaccaagtgagcggt
atggatacagttatcggcctgtatggagagaccattgaggtgccatgcaacaatggagcc
cccaaaccaaaggacctgttcatgaccaaatggaaatacgacgatggagacctgctgacc
cagcttaaagaccaggacgcctctgtcatagccactgacaagtacaaggaccgtgtcagc
atggccgaaaactccagcctgctaattgctgcagcaacactgaaggacgagaagactttt
acttgcatggtggtggctggggctgacatctcagaatacccagtcaaactccttatccac
aaggctccaaccggagtggagatcacagccctagccacggagctggagattggcaaacca
acccagctagggcaatgtagcacctctgatgccaacccagctgccagcatcacatggttc
aagaacaagaaacctctggtggctgatgggaaaggcattataatcagttccaaagtaaag
gtggacgaagtcactggcctcaccaccacctcctccattctgcagtacacagctgagaag
ggagacacagcagctctgttcacctgcggggctttgaataccttgtcctctccagtctcc
ttcactgtcacctaccccacagagaggatcagtctgcatgtcatttcgaaagggccccta
atggaaggagccaatgtgactctgaagtgcaaggccgacgggaacccacctcccaccagc
ttcaacttccacattctgggaaaggtggtgaaggtggagaactctgactcctacactgtg
actgatgtcacacgtgaaagcacaggggaatacaagtgttctataattgacaatgccaag
atggaagattccaagaacattaccatcaattacttggatatgagtttgagcccctcaggg
aaggttatgaagagctttggcgaaggcttggctctgaccctgcagacccatgcatctgga
gaacttaaggtgtcttggactaaggacaatggcaagttggacagtcgtcccacatttgac
aagttgacctactctgattctggaaagtatgaagttgtggtcaccatgggtcctctcatc
aagaaagcctcttttgagctggtcgttgaaggtgttccagtcattcggcgggtggccaag
cggcgcggcgaggacggccagcataaggtacttacctgcgaggctgagggctcccccaaa
ccaactgtggcctggagcgtcaacggtacctcggctgatgagagtccctatgtcaatgga
aagatcacacacaagctgaccattgtgcctacagtcaacctgaccgttgtctgcactgtg
tccaatgagcttggccaggacaccaggactattaacgtgtcgaccttatttgaggaggtg
agaatggataaacaagactcatccgatgagggtgacacgacaaagttggtggtaggagtt
attgttggtcttctcctggccaccgtagttgtgggtctagcatactggctgtacatgaag
aaatccaagcaaggcagctggaagactggtgagaaggaggatggatccactgaggagagc
aagaaactggaggagaaaatagaagaaaagctggaggagaacagccagaaagttgaggtg
taa
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