Oncorhynchus tshawytscha (Chinook salmon): 112267239
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Entry
112267239 CDS
T05605
Name
(RefSeq) chordin
KO
K04657
chordin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112267239
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Amnionless
DUF3040
Motif
Other DBs
NCBI-GeneID:
112267239
NCBI-ProteinID:
XP_042153488
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All DBs
Position
LG14:42682320..42708797
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AA seq
952 aa
AA seq
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MLPLAGMQTRSALSSLLCVMSCAWLHSGLASRHKSPVLPIHSEREPLPSKGMSGCSFGGR
FYSLEDTWHPDLGEPFGVMHCVQCYCETQRGRKSKVLGKVSCKNVKRDCPEPSCDDPVLL
PGQCCKTCSKGEVDRKQAEAVFDGFEYFQEKEKEDDLHKSYNDRSYLSSEDISSGESRTD
FVAVLTGVTGSWLPSSSGVARARFSLTRTSLTFSITYQRIGRPSRVAFLDSDGNTAFEYK
TPKRDSDMICGVWKNLPQSHVRQLQAEQLRVTMTTATGRREQIEGKIIKHRALFAETFSS
TLTSEKEHSGMGGIAMLTLSDTENNLHFILILQGLIQHRQRDSPLVPIRVRLQYSQHVLR
EIHANVTAYDPDFAEVLTDLNSRELFWLSRGQLVIAVETEGPDPRHISGFITGRKSCDTI
QSVMSSGDALTPGKTGGVGSAFFHLHDNGTLDYQVQIAGLSSEVVGLTIELKPRRRSKRS
VLYDLAPEFDRPSGRATGSWSRLEARHIHMLLQNELFINVATAHSQEGELRGQIRGLLYS
GLEAPRHEIPIPLAGQFVAPPVLTSAGGHAWVSVDERCHLHYEIVVAGLNKADDLTVSAH
LHGFAEIGELGESSTNHKRLLTGFYGSQAQGVLKDISVELLRHLDRGTAFIQVSTKVNTR
GEIRGRVHVPNNCEFGTRGEVEVAEFDGLFVHDPEELKKDPHTCFFESQHHAHGSLWTPN
YNNCFTCSCQKRTVICDPVICPVLTCSRTIQPEYKCCPVCLERKDPKNMKTPERLDEHPE
GCYFEGDQKMHAPGSTWHPFVPPFGYIKCALCTCKGATGEVHCEKVTCPALTCSRPVRRS
PSDCCKECPEEDKPLLVHADMMQADGTRHCKFGKNFYQNSDNWHPRVPLMGEMKCITCWC
DHGVTKCQRKQCPVLTCSNITRREGMCCPECQDSKEEEELMKVPEKKNSWRH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgctaccactcgccgggatgcagactcgcagcgcgctgagttccttactgtgcgtgatg
agctgcgcgtggctgcactctggactggcctcacggcataaatctcccgttctgcccatc
cattcggagagggaacctttaccatccaagggcatgtcaggatgttcattcggaggaaga
ttctattctctggaggacacttggcaccctgacctcggggagccgtttggagtcatgcat
tgtgtccaatgttactgcgagacacaaaggggtcgtaagagtaaggtgttggggaaggta
agctgtaagaacgtcaagcgggactgtcctgagcctagctgtgatgacccagtactgcta
cctggacaatgctgcaagacctgctccaaaggcgaggtggacaggaagcaggcggaggcg
gtgtttgatggcttcgagtacttccaggagaaggagaaagaggatgacctgcacaagtcc
tacaatgaccgctcatacctcagctctgaggacatttcctctggggagagccgcactgac
tttgtagcagtgttgacgggagtgacaggctcctggttacccagctccagtggtgtggcc
cgggcacgcttctctctcactagaaccagcctgaccttctccatcacctaccagaggatt
gggcgaccaagcagggttgccttccttgattcagatggaaacactgcgtttgagtacaag
acccctaagagagactcagacatgatctgcggggtgtggaagaatcttccccaatcccac
gtgcgacagctacaggcagaacaacttcgggttactatgacaacagccactggtagacgg
gagcagatcgaaggaaagatcatcaaacacagagcactgttcgcagagacgttcagctcc
actctgacctcagaaaaagagcattctgggatgggaggcatcgccatgctgactctgagt
gacacagagaacaaccttcacttcatcctcatactccagggactgatacaacacagacag
agagactcccccctggtgcccatccgggtacgactgcagtacagccaacatgtcctgaga
gagatccatgccaacgtcaccgcctatgacccagactttgctgaggtactgacagacctg
aacagtcgggaactcttctggttgtcaaggggccagctggtgatcgccgtagaaaccgag
ggcccggaccccagacacatctctggcttcatcaccggcaggaagtcatgtgacaccatc
cagagtgtcatgtccagtggtgatgcattgacaccagggaagacaggtggtgtgggatca
gcattctttcatctccatgacaacggcaccctggactaccaggtccagatagcggggtta
tccagtgaagtggtgggtctgaccatcgagctaaagcctcggcggcgcagtaagcgctcc
gtgctgtatgacctagctccagagttcgacaggcccagcgggcgagcgacgggaagctgg
agtcgtctggaggcgcgtcacatccacatgctgctgcagaacgaactgttcatcaacgtg
gctactgcacacagccaggagggggagctacgtggacagatcagaggcctgctctacagt
ggtctggaggcacccagacatgagatccctatccctctggcaggccagtttgtggcccct
ccagtcctgaccagtgctgggggccatgcgtgggtgtctgtggatgagcgctgtcacctc
cattatgagatcgtggtggcaggcctcaacaaagctgatgacctcacagtcagcgcccac
cttcatggatttgccgaaatcggagagcttggcgagagcagcaccaatcacaagagactg
ctgacagggttctacggttctcaggcccagggtgtgttgaaggacatcagtgtagagttg
ttgcgtcacctggacagagggacagccttcattcaggtcagcaccaaggtcaacaccaga
ggagagatacgtggacgggtccatgtgcctaacaactgtgagtttggaacaaggggtgag
gtggaggtggctgagtttgatggcctgtttgtgcatgatccagaggaactaaagaaagac
ccccacacctgtttcttcgagagtcaacaccatgcccacggctcactctggaccccgaac
tacaacaactgtttcacctgcagctgtcagaagcgcacagtgatctgtgacccggtcatc
tgtccagtcctcacctgttctcgcaccatccaacctgagtacaagtgctgtcccgtgtgt
ctcgagcggaaagaccccaagaacatgaagactccagagagactagatgagcatccagaa
ggttgttactttgagggggaccagaagatgcatgctcctgggtcaacatggcatccattc
gtccctccatttggctacatcaagtgtgccctctgcacctgcaagggggcgacaggcgag
gtgcactgtgagaaggtgacgtgtccagccctgacctgcagtcgtccggtacgccgtagc
ccctcagactgctgtaaggaatgtccggaggaagacaaacccctcttggtgcacgctgac
atgatgcaggcagacggaacgcgtcactgcaagtttgggaagaacttctaccagaacagt
gacaactggcacccccgtgtgcccctgatgggagagatgaagtgcatcacctgctggtgt
gaccatggtgtgactaagtgtcagaggaaacagtgtccagtcctgacctgtagtaacatc
acccgccgggagggcatgtgctgtcctgagtgccaagattccaaagaggaagaggagctg
atgaaagttccggaaaagaagaacagctggagacactga
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