Oncorhynchus tshawytscha (Chinook salmon): 112267243
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Entry
112267243 CDS
T05605
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1 isoform X1
KO
K03260
translation initiation factor 4G
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112267243
03012 Translation factors [BR:
otw03012
]
112267243
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112267243
mRNA cycle factors
Stress granule specific factors
112267243
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112267243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
112267243
NCBI-ProteinID:
XP_042153492
LinkDB
All DBs
Position
LG14:complement(43102853..43168496)
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AA seq
1664 aa
AA seq
DB search
MNKAPQSITRPHPALSPGLQLPTFPPGQPPSVVFATPPPQMNPAPQPRQFAPVPRALHQQ
PYYSRPSLHSNAPRVPPSSTPRPVAPTHVYQPGQQMMMIPSQRIPFPNQQGPAYFIPGQY
RSTYVATPQQYPVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTPSLPAAPGIMNPPPQQ
QQLPPQQQIQPKRERKQVQIIIRDPNQGGRDITEEIMSGGTRSGTTPTPPQVSDDSSESS
GSEGPAVAQANGENVTPVVVRPDDRGKPAATLITGPPALSKTPELVKTAPAPTEVKLPDT
DSKSPSLPQDLPTPPRVTTTLHTTAPGTPPPPTSPIADMMDAPALAAAPALSAPKVPAYP
APLPEPRPTPAAEEQPSAAKEAREEVKEKEVTEAREVTTSSKPEPSLAPVTNPSSSTNGV
SATQPLPEEEPVALSITMPSLQAAEPSLESPIAQPEELRLPNGLPLPSSQDPEKVSAELS
ECDLSPIAEPEVTPLQREAPVAATAKPDPVVQATVAPVVLAETAITTEVTPRQIEDEMDS
PPSQRTIPPGENSMQAAVSVPKKKRKMKDLNRKEAVGDLLDAFKEEQVVQSPPEQATPTS
ASDTEEPRPATTPAVAEVDETWEEKEDKLDAENIEPKPGDLKYQYKEELCRPIDPEEKKR
YDRDFLLGFQFISAAMSKPEGLPQISDVVLDKANKAPLRQLDPSRLSGMNMGTDFTPSFA
NLGRPGMGGGGGGHRGPPSGMGGGGPRRSQQGQRKEPRRIINISSSLTDDVKLNKAEDAW
KPAVKKAASGQAAPEEESDNPEQAKTHELFKRVRSILNKLTPQMFQQLMKQVKELTIDTE
QRLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPGVTVNFRKLLLNRCQKEF
EKDKDDDAIFEKKQEELDSAAMEEKDRLKAELEEAKDIARRRSLGNIKFIGELFKLKMLT
EAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFVQIDKIIKEKKTS
SRIRFMLQDVLDLRRNTWVPRRGEQGPKTIDQIHKEAELEEHREVLKVQQQLLNQNTRGG
RGGGGGGRDQGNRGGQHPQSGQRSQPQDEGWNTVPISTKSRPIDTSRLSKITKPGAFDFN
NQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAGEATPESGGRPATSTLNRFSALQPQQPSS
SGPSQDSDRRVPLRNSSSRDRGSNDRFGRRDDRNPVTKRSFSRETEEHSREQHRGPSDPI
RRVASMTDDRGTRDRARSKENVKREAAATPPAQTKPSLGEEELEKKATAIIEEYLHINDM
KEALQCVVEINSTRLLFVFVRSGLESTLERSPIARERTGLLLHQLYKAGTLPTEQYYRGL
QEILEVAEDMAIDIPHIWLYLAELITPMLHEGGIPMGPLFKEISKPLVPQGTAGVLLAQI
LTLLCRGMSCKKAGAMWREAGLSWKDFLPEDEDVNKFVTEKNVEFTLGGEGDETEKSIKK
ELSSEELNKQLDRLIQDKADNQRIYDWVEANLDETQISSNVFVRAVMTAICQSAILCENP
YKLDAKVITRRAKLLHKYLKDEQKELQALYALQALMVEMEQPANLLRMFFDTLYDEDVIK
EQAFYKWESSKDPAEMQGKGVALKSVTAFFTWLREAEDEESDNS
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagtctataacgcgaccccaccctgccctctcccctggactccag
ctacccaccttccctcctggacagcccccctctgttgtctttgccaccccacctccacaa
atgaacccagcgccacagccccgacagttcgccccagtgccccgtgctttacaccaacag
ccgtactacagccgtcccagtctacacagcaatgccccccgggtgccccccagcagcacg
ccgaggcccgtggcgcccacacacgtctaccagccaggccaacagatgatgatgatcccc
tcacagcggatccccttccccaaccaacaaggccccgcctacttcatacccggacagtac
cggtcaacatatgtggccaccccccagcagtacccggtcccgccgggcaccccaggcttc
tacccaggcaccagcccagctgaatatggtacttacgcaggggcatactacccggcccaa
cagcagtacacgccctccttgccggctgctccgggtatcatgaaccctcccccccagcag
cagcaactacctccacagcaacagatccagcccaaaagggagcgcaaacaggtacagatc
ataatacgagaccctaaccagggtggtagagacatcactgaggagattatgtcagggggc
actcgcagtggcaccacccccacacccccacaggtgagcgacgactcttcagagtcatct
ggatcagagggcccagccgttgcccaggccaacggtgagaacgtgacacctgtcgtggtc
agaccagatgacagagggaaacctgcagccacactcatcactggccccccagccctgtcc
aaaacccctgaactggtcaagactgcccctgcccctacagaggtcaaactcccagacacg
gacagtaaatccccttccttaccccaggacctacccacacccccacgggtaactaccacc
ctccacactactgcccctggcacccccccacccccaactagtcccattgcagacatgatg
gacgcaccagccctggccgctgctccagccctatctgcccctaaagtgcctgcttaccct
gcacccctacctgaaccccgccccactcctgcagctgaggagcagccctcagccgccaag
gaggcgcgggaggaggtgaaggagaaagaggtaacggaggctagagaagtgactacatca
tctaaacctgagccttcccttgctccagtgaccaaccctagcagcagcactaatggtgtg
tctgccacccagccactcccagaggaggagccagtagccctgtccatcaccatgccctcc
ctccaggcagcagaaccctcgctggagtctcccatcgcccagccagaggagctccgtctg
cccaacggcttgccgctccccagctcccaggaccctgagaaggtttctgcagagttgtct
gagtgtgacctcagccccatcgctgagcctgaggtgaccccattacagagggaggcgcct
gtcgccgccacggcaaagcccgaccccgtcgtccaggcgaccgttgcccccgtggtccta
gcggagactgctattactacagaggtaacccctcgccaaattgaagacgagatggactct
ccaccatcacagcgcaccatcccacccggggagaattctatgcaagctgctgtttctgtg
cctaagaagaagaggaagatgaaggatctgaacaggaaggaggctgttggagacctcctg
gatgcctttaaggaggagcaggtagtgcagagcccgccagagcaggccacacctacttct
gcctctgacaccgaggagccccgcccagccaccacccctgccgtcgcagaggtagatgag
acgtgggaggagaaggaggacaaactggatgcagagaacattgaacccaagcccggggat
ctgaagtaccagtacaaagaggaactatgtaggcctatagacccagaggagaagaagagg
tatgacagggacttcctgctgggcttccagttcatcagtgctgccatgtccaagcctgag
ggcttgcctcagatcagtgatgtggtgctggacaaggcgaataaggcccctctccgccag
ttggaccccagccgtttgtcggggatgaacatgggcactgacttcacgccctcatttgcc
aacctgggcaggcctggaatggggggaggaggaggtggacacagaggaccaccctctggt
atgggtggtggaggaccgcgtcgctcccaacagggtcagcgtaaggagcccaggaggatc
atcaacatctcttcgtctctgacggatgacgtgaaactcaacaaggctgaggatgcctgg
aagcccgctgtcaagaaggctgccagtgggcaagcggctcctgaggaggagagcgacaac
ccagaacaggccaagacccatgagctgtttaagagggtccgtagtatcctgaacaagctg
acccctcagatgttccaacagctaatgaagcaggtcaaggagctgaccatcgatacggag
cagaggctgaagggagtgatagatctgatctttgagaaggccatttctgaacccaacttc
tccgtggcctacgccaacatgtgccgctgccttatggggctcaaagtccccactacagac
aagccgggagtcactgtgaatttccgcaagctgcttctgaaccgttgtcagaaggagttt
gagaaggacaaggacgatgatgccatctttgagaaaaagcaagaagagctggactctgca
gccatggaggagaaggatcgcctgaaggcggagttggaggaggccaaagacattgcacgg
cggcggtcgctaggcaacataaagttcatcggtgagctgttcaagctcaagatgctgacg
gaggccatcatgcacgactgcatcgtcaagctgctgaagaaccacgatgaggagtcacta
gagtgcctctgtagactcttgtcaactataggcaaggacctggactttgagaaggcgaag
cctcgtatggaccagtactttgtccagatagacaagatcatcaaggagaagaagacctcg
tccagaatccgcttcatgctgcaggacgtactggacctcaggaggaatacgtgggtcccc
aggagaggagagcagggccccaagaccatagaccagatccacaaggaggcagagcttgag
gagcacagggaggttctcaaggtgcagcagcaactcctcaaccagaacacccgaggagga
cgtggtggtggaggaggaggaagagatcaggggaaccgcgggggccaacacccccagtcg
ggccagaggagtcagccccaggacgagggctggaacacagttcccatctccaccaagagc
agacccatcgacaccagtcgactcagcaagatcactaagcccggggctttcgacttcaac
aaccagctgttggcgccccagctcgggggtaagggcatgtggggcagttggggcaagggc
agcagtgggggcaccaccggagccaaacccgccggggaagccaccccagagtcaggaggc
cgcccagccaccagcacccttaacaggttttcagccctgcagccacagcagccctcctcc
tcagggccctcacaggactcggacagaagagttcctctaaggaacagctcgagccgggac
cgtggcagcaacgaccgcttcggccggcgggacgacaggaacccggtcaccaagcggagc
tttagtagggagacggaggagcacagcagagagcagcaccgcggcccttctgatcccata
cgccgcgttgccagcatgaccgacgaccggggcaccagagaccgagctaggagcaaagag
aatgtgaagagggaagctgctgcaacacctcctgcacagaccaaaccttccttgggggaa
gaagagctggagaagaaggccacagctatcatagaggagtacctacacatcaacgacatg
aaggaggcgctgcagtgtgtagtggagattaacagcacccggctgctctttgtgtttgta
cggagcggtctggagtctactctggagcgcagccccatcgccagagaacgcaccggcctg
ctgctgcaccagctgtacaaggcaggcaccctgcccacagagcagtactacagagggctt
caggagatactggaggtggcagaggacatggccatagacatcccccacatctggctctac
ctggctgagctcatcacccctatgctccacgaaggaggcatccccatgggaccgctcttc
aaggagatatccaagcccctggttcctcaggggacggctggagttctgctggcccagatc
ctcaccctactctgcagaggaatgagctgtaaaaaggcaggtgccatgtggagggaggcg
gggcttagctggaaagactttctgcctgaggacgaggacgtcaacaagtttgtgacagaa
aagaatgtggagttcaccctgggaggagaaggtgatgagacagagaagagcattaagaaa
gagctgagctcagaggagctgaacaaacagctggacagactcatacaggacaaggctgac
aaccagaggatctacgattgggtcgaggctaacctggacgagacacagatatcctccaac
gtgtttgtcagagcagtcatgacagccatctgccagtcggccatcctgtgtgagaaccct
tacaagttggatgcgaaggtgatcacccggagggccaagctgctccacaagtacctgaag
gatgagcagaaggagctacaggctctctacgccttgcaggccctcatggtggagatggag
cagcctgccaacctgctgcggatgttctttgacacgctgtacgacgaagacgtgatcaaa
gagcaggccttctacaagtgggagtccagcaaggaccccgctgagatgcagggcaagggt
gtggccctgaagtcagtcactgccttctttacctggctccgtgaggccgaggacgaggag
tctgacaacagctag
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integrated database retrieval system
