Oncorhynchus tshawytscha (Chinook salmon): 112267317
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Entry
112267317 CDS
T05605
Name
(RefSeq) extracellular calcium-sensing receptor
KO
K04613
vomeronasal 2 receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112267317
G protein-coupled receptors [BR:
otw04030
]
Others
Chemoreception
Vomeronasal pheromone
112267317
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
112267317
NCBI-ProteinID:
XP_042152511
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Position
LG14:54194541..54203988
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AA seq
868 aa
AA seq
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MSPWFTWLTQAIPLLLPWLVRVGVGMAQATVCSRRDHSVGLDDLGLSQEGDVVIGAVFPI
HNLPPAPDLSFSQHPNLQSCVNFQEEPLRWMHALVFAVDEINRNPFLLPGVRLGYRVLDS
CAWPSSDSHVPLVIGDASSTQAIVLARTLGPLSVPVISYQASCGCLSDRQEFPNFFRTIP
SDVYQALTMARLTWLLGWTWVGAIAADNDYGRQAVFEAAVRGTGVCLAFFETLNRANLVR
DVERAADTVQASTARVILVFLWYTDIGALLLELGRRNVTDRQFLASEAWSTSGQLLRNPA
LFNVARGVVGVAIRSAPMPGFEAHLRSLHPSRRPRDVLLKELWETEFGCSPGVAHGHDTS
LLPSPLPPTPSESLPHPPPPTSSTSRLRLASCSGAETLEMVQSPFTDTSQLRITYNVYLA
VYAAAHALHSLLSCPQRDSPSWGNSFTCSPPYKISPAELLQHLNQVNFTTPLGEPFYFQG
ADVPAVYDLVNWQATPQGLLKLVTIGRVEGSNILIDQSAIQWNAGSNMVPVSVCSDSCSP
GTRVARKKGEPVCCFDCISCAEGEVSNTTGSLQCDRCPLEFWSNGNRTACIPRQLEFLSF
NDTMGVTLTTVAVCGAVATAAVFMLFVYHRHTPLVRANNSELSFLLLLSLKLCFLCSLVF
IGRPSVWACQIRQAAFGVIFVLCLSCLLVKTIVVLAAFRSARPGAGQLMRWFGPVQQRGS
VFLFTSVQVIICAVWLSICPPLPYRDLGLKGSKVILECEMGSVAGFSLVLGYIGLLASLC
LLLAFLARKLPDNFNEAKFITFSMLIFCAVWISFVPAYISSPGKYADAVEIFAILASSFG
LLFCLFAPKCFIILLRPERNTKKHMMDK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtccccctggttcacctggctgacacaggccattcccctgctactgccctggctggtc
agggttggggtagggatggctcaggcaactgtgtgttcacggcgggaccattcggtcggt
ctggatgaccttggtctatcccaggaaggtgatgtggtgatcggggctgtcttccctatc
cataacctcccccctgctccagacctgagcttcagccaacaccctaacctgcagtcctgt
gtcaatttccaggaggaaccgttgagatggatgcatgcactggtgtttgcagtggatgag
attaaccgtaaccccttcctgctgccgggagtccggctgggctaccgtgtcctggacagc
tgtgcatggccatcaagcgactcccacgttcctctggtcattggtgatgcatcgtccact
caggccatcgtcctggccaggaccctggggcccctctctgtgcctgtgatcagttaccag
gccagctgtggctgtctcagtgacagacaggagttccctaacttcttcaggaccatcccc
agtgatgtctaccaagccctcaccatggcccggctcacctggctcttgggatggacctgg
gtcggggctatcgctgcagacaatgactacggtcgtcaggccgtgtttgaggcggcggtt
cgggggacgggggtgtgcctggcgttctttgagaccctcaaccgggcgaacctggtgagg
gatgtggagcgagcagcagacacggtccaggcctcgacagcgcgggtcatcctagtcttc
ctctggtacactgacataggggcgttactcctggagctggggaggagaaacgtgacggac
aggcagttcctggccagtgaggcatggagcaccagcggacaactgctacggaaccccgcc
ctctttaacgtcgctcggggcgtcgtgggtgtggctatccgtagtgcacctatgcctggc
tttgaagcccaccttcgaagtctccacccctctcgtcgccccagagacgtcctgttgaag
gaactctgggaaacggagtttgggtgtagccctggagtagcacatggacacgacacgtct
ctgctcccctctccccttcctccaaccccctcggagtcactaccacatccccctcctccc
acctccagtacctcccgtttacgcctggcctcctgcagtggggcagagactctggagatg
gtgcagagccctttcacagacacctctcagctgagaataacctataatgtgtatctggct
gtgtatgctgcagcccacgccctccacagcctgctgtcctgcccccagagagacagccct
tcctggggtaacagcttcacctgctcccctccttacaagatcagcccagcagagctgttg
cagcacctgaaccaggttaacttcaccactccacttggggagccgttttacttccagggc
gcggatgtccctgctgtctacgaccttgtgaactggcaggccacgccacaggggttgctc
aaacttgtcacgattggccgagtagaagggtccaatatcctcatcgaccaatcagccatc
cagtggaacgcaggatctaatatggtgcctgtgtcagtgtgcagtgacagctgttcccca
ggcacccgtgtagccaggaagaaaggggagcctgtctgctgcttcgactgcatctcctgt
gctgagggagaggtcagcaacaccacaggctctctacaatgtgaccgctgtcctctggag
ttctggtccaacggcaatcggacggcctgcatccctcgtcagctcgagttcctctccttc
aacgacaccatgggcgtcactctgaccactgttgccgtgtgcggcgctgtggcaacggcg
gctgtgtttatgctctttgtgtaccaccgccacactcctctggtgcgggccaacaactca
gagctgagtttcctgcttctcctgtcactcaagctctgcttcctgtgttcgttggtgttc
attgggcgtccctcggtgtgggcgtgtcagatccgccaggcggcgtttggggtcatcttt
gtgctctgtctctcctgcctccttgtcaagaccatcgtggttctggctgcgttccgctca
gccaggcccggtgctgggcagctgatgaggtggtttggacctgtgcagcagagagggagt
gtcttcctctttaccagtgttcaggtgatcatctgcgccgtgtggttgtcgatatgtcct
cccctgccttaccgtgacctaggcctcaaggggtctaaggtcattctggaatgtgagatg
ggctctgtggccggcttctctctggtgctgggctacatcggcttgctggcctctctctgt
ctcctcttagccttcctggccaggaaactccctgacaacttcaacgaggccaagtttatc
accttcagcatgctgatcttctgtgctgtatggatctccttcgtccctgcctacatcagc
tctcctgggaagtacgcagatgcggtggagatattcgccatcttagcatccagctttggg
ctgctgttctgtctgtttgctccaaagtgtttcatcatcctcctgagaccagagagaaac
accaagaaacacatgatggacaaatag
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