Oncorhynchus tshawytscha (Chinook salmon): 112267326
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Entry
112267326 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 26
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112267326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267326
Membrane trafficking [BR:
otw04131
]
Endocytosis
Macropinocytosis
Others
112267326
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112267326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
PH
ECT2_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
112267326
NCBI-ProteinID:
XP_042153625
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All DBs
Position
LG14:complement(54879080..54979961)
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AA seq
888 aa
AA seq
DB search
MEGGNEVDLSNNNISPLWKRQSANHTGPSKLKARPLSYQIDRLHMTDFPVEDNKCSFTLS
QPAERLVATPGGGTVILKHVLNQPTRRTRVVRSISIGHLSKGRFSLSKFKSEDKFSSLDN
KAYHGGSVGQIGNKEKVWSDKRPRDALKRLSSPFTLTSHRDQIVFGTSSSLPDPASSSHP
SPPATPNNNHHHNLTSSSSYHPLTPHPSPPSLHTPTPSHSSTCSISSLTSTSTPSDPPTP
RSPSPADMSAPSLSPPPSIVLSTHSAAALKMGTQQLIPKGLASLSKASPAGVQSQGLGGL
LGLDPTKRALRAVSMVETGSFFSTDGGGEGTDQDESPGSLKRGLRSTSYRRAVVSGVEME
IPSVDPKTHLLSQSVLKGLQEAKETPTSPGKKNKRPDKKPGLITQRTFDREEEELYQNYQ
EKALHNDSDEDQSREPKPDEGIVVQYRPIRTSWSQLSVAIFELISSEHSYLHSLEVLIRM
FQNSAELSDTMTKTEHHHLFSNITDVCEASKKFFKELEDLHQQNVVIDDISDIVFRHAQS
NFDPYITYCSNEVYQQRTLQRLVSKSPVFKEVLTRIEGHPDCRNLPMISFLILPMQRVTR
LPLLMDVICQKASKGSSQYEACKKALQSVSKVVRQCNEGARTMERTEMMYTINSQLDFKI
KPFPLVSSSRWMVKRGELTAFVEENGIFSKRTSRHQVYFFLFNDVLILTRKKSEDSYAVI
DYALRDHIWVGPCQAQDINLSPIRTTAGMLTSRHPGASHLFRLCFRSNHSGDKVPMVLGV
ELMNERARWITALGQSSNDEKNQDRTNAMQVVVTRTYTAKQPDELSLQVADVVLVSQTVE
DGWYEGERLRDGERGWFLSECAEPITCQATIERNVQRMDRLQGLETNV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgggaacgaagtggatctgtccaacaataacatcagtccgctgtggaagcgg
caatcagccaatcacactggtcccagcaagctaaaggcccggcccctcagctaccagata
gacagactccacatgactgacttccccgtagaggacaacaagtgcagctttaccctgagt
cagcctgcagagcgactggtggccacgccgggaggagggacggtcattctgaagcacgtt
ctcaaccaacccaccaggagaacacgggttgtcaggagtatcagcattggacatctgtcc
aaaggacgtttctctctgtccaagttcaagtcggaggataagttttcgtcattggacaat
aaggcgtaccatggtggaagtgttggtcaaatcggtaacaaggagaaggtgtggtcagac
aagcggccacgcgatgccctgaagcgactctccagtccgttcaccctcacctctcacaga
gaccagatagtgtttggaacaagttcctcactgccggaccctgcctcctccagtcacccc
tccccccctgccacccccaataacaaccaccaccataacctgacctcctcttcttcctat
caccccttaacccctcacccttctccccctagtctccacacccctaccccatctcacagc
tccacctgcagtatctcctccctcacctccacctccaccccttctgacccccccacaccc
cgcagcccctcccctgctgacatgtctgccccctccctctctcctcctccctccattgtc
ctcagcacccacagtgcagctgccctgaagatgggcacacagcagctgatccccaaaggg
ctggcgtccctgagcaaggcctctcctgctggggtacagagccagggcctggggggtctg
ctgggcctggatcctaccaagcgggccctacgagctgtcagcatggtggagactggatcc
ttcttctccacggacggagggggagaggggacagaccaggatgagagccctgggagtctg
aaaagggggttgaggtctacctcgtacaggagggcagtggtgagtggagtggaaatggaa
ataccatctgtagacccaaagacccatctcctgtcccagtctgtactcaaaggactacag
gaggccaaggagacaccgaccagccctgggaagaagaacaagaggccggataagaagcca
gggctgatcacacagaggacttttgacagggaagaggaggaactgtatcagaactaccag
gagaaagctcttcacaatgactctgatgaggaccagtccagagagcccaaacctgacgag
ggcatcgtggtgcagtacagacccatacgcacctcgtggagccaactcagtgtggccata
tttgagttgatatcgtcagaacactcctacctccacagtctggaggttctgatccggatg
tttcagaactcagcggagctcagtgacaccatgaccaagaccgagcaccaccacctcttc
tccaacatcacagacgtgtgtgaggccagcaagaagttctttaaagagttagaggacctg
caccagcagaacgttgttatagatgacatcagtgacatcgtgttcagacacgcccagtcc
aactttgacccctacatcacctactgctccaatgaggtttaccagcagaggaccctacag
aggctagttagtaagagtccagtgtttaaggaggtgttgactcgtattgagggccaccca
gactgcaggaacctcccaatgatctccttcctaatcctgccaatgcagagagtcacccgt
ctgcctctgctgatggatgtcatttgtcagaaggcttctaaaggctcatctcagtatgag
gcctgtaagaaagcccttcaatcagtcagcaaggtggtacgtcagtgtaacgaaggggcc
cgtaccatggagagaacagagatgatgtacaccatcaactctcaactggactttaagatc
aagcccttcccattggtgtcgtcgtctaggtggatggtgaagagaggggagctcacagcc
ttcgtggaggagaacggcatcttctccaagaggacgtcacgtcatcaggtctacttcttc
ctcttcaatgacgtcctcatcctcaccaggaagaagagtgaagacagctatgcagtgata
gactatgctctgagggaccatatctgggtgggaccctgccaggctcaggatatcaaccta
tcacccatcagaaccaccgctggaatgctgacatcacggcatcccggggccagccacctc
ttccgcctgtgtttccgtagcaaccattccggagacaaggtgcccatggtcctgggggtg
gagctaatgaatgagcgagctcgctggatcactgctctgggtcagagcagcaacgacgag
aagaaccaagaccggaccaatgccatgcaggtggtggtgacgaggacgtacacagccaag
cagcctgatgagctgtcactgcaggtggctgacgtggtcctggtgtcacagactgtggag
gatggctggtatgagggcgagcgactccgtgatggcgagaggggttggttcctgtcagaa
tgtgctgaaccaatcacgtgccaggccactattgagcgcaacgtgcagaggatggaccgc
ctccaggggctggaaaccaatgtgtga
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