Oncorhynchus tshawytscha (Chinook salmon): 112267354
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Entry
112267354 CDS
T05605
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112267354
04371 Apelin signaling pathway
112267354
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
otw04090
]
112267354
CD molecules [BR:
otw04090
]
Proteins
112267354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF
hEGF
DSL
DL-JAG_EGF-like
JAG1-like_EGF2
EGF_2
EGF_CA
EGF_3
cEGF
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
112267354
NCBI-ProteinID:
XP_042153028
LinkDB
All DBs
Position
LG14:19097399..19151870
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AA seq
778 aa
AA seq
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MERERAHGRNPVDCCSGGARSCARTEMRRDRRWRQQWTVIFLIALALQPQAVCAVGMFEL
QIRHFQNPQGVLQSGECCDLQATEGQRCSPRDQCDTFFKACLKEYQARVVPTGACTFGAG
STTVLGGNTQSLRHRGHDGGGGGGGGGGDVTTGHIVIPFKYAWPKSFSLVLEALDHDNKT
SESGQAGLIERVLLSSMLNPGEQWQTYRHHGRSLSLEYRLRYRCDLNYYGPFCNKFCRPR
DDFFGHFDCDVSGIKVCKEGWTGPECREAVCRQGCHQIHGSCSVPGECKCHYGYEGALCH
RCMTFPGCVYGSCVEPWQCVCDVNWGGLLCDKDLNYCGTHRPCKNGGTCSNTEPNEYQCE
CQEGFRGRNCDIVEHACLSSPCANGATCAEEPSGFSCVCADSWTGHTCADAARQCDSNPC
GRGATCQESPEGFRCLCPPGWTGRTCQLDTNECDTGVCVHARSCRNLIGGYLCDCLPGWA
GPTCDVRNSSCQGLCLNGGHCEDSVSGSHCLCVPSFSGKHCQTGPSPCDSTPCQHGGQCV
DTEGRAELCSCPMGYSGTYCEMVVDLCNPNPCQQGVPCQSTDGGYTCACPEGYYGNECTS
LKDPCHGQHCPGAMSDPARGGVHLYMVLVGVSALVTACGCAACALLLSRLHRRRKKTQGG
PQEEGINNQREFVTLVRNLDRPAPLLPPLTPNTTAHTPVPVPVPRFCEEIELTLPPPRPP
HTPPLHSNHQTTRPNRTSPTVRGRSSTASTTQTNRNWRCDLWTFQPSRGFYYFAPASL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaaagagcgcacggacgaaatccggttgattgctgcagcggaggtgcgagg
agctgcgccaggacggagatgaggagagatcggcgctggagacagcagtggaccgtgatt
tttctcatcgccctcgctctgcagccgcaagctgtgtgtgcagtggggatgtttgagctg
cagatccgtcacttccagaacccccaaggtgtgctgcagagtggagagtgctgtgacctc
caggccaccgaggggcagcgctgctctcccagggaccagtgtgacaccttcttcaaggcc
tgcctcaaggagtaccaggcccgcgtcgtccccaccggagcctgcaccttcggggcgggc
agcaccaccgtcctggggggcaacacccagtccctccgtcatcgaggtcatgacggagga
gggggaggagggggaggaggaggggatgtcactacaggacacattgtcattcccttcaaa
tacgcctggccgaaatctttctccttggtgttagaggctctggaccatgacaacaaaaca
tccgaatcaggtcaggctggtctgatcgagcgtgtcctcctgtcctccatgttgaatccc
ggcgagcagtggcagacgtaccgtcaccacggacgctcgctcagcctggagtaccgcctg
cggtaccgctgtgacctcaactactacggccccttctgcaacaagttctgccggccccgg
gacgacttcttcggacactttgactgtgacgtcagcggcatcaaggtctgcaaggagggc
tggaccggaccggagtgtcgagaagcggtgtgcagacaggggtgccaccagatccatggc
tcctgctctgtgcctggagaatgcaagtgtcactacggctatgagggtgctctgtgtcac
cggtgtatgacgttcccaggctgcgtctacgggagctgcgttgaaccctggcagtgtgtg
tgtgacgtcaactggggaggcctgctgtgtgacaaagatctgaactactgcggtacccac
cggccctgtaagaatgggggcacctgttccaacacagagcctaacgagtaccagtgtgag
tgccaagagggcttccgcgggcgcaactgtgatatcgtggagcatgcgtgtctctcgtcc
ccctgtgcgaacggggccacctgtgcggaggaaccgtcgggtttcagctgtgtctgtgcg
gacagctggaccggacacacctgcgccgacgcggcgcggcagtgtgactcaaacccgtgt
gggcgaggggcgacgtgccaggagtctccagaggggttccggtgcctctgcccccccggc
tggactggcagaacctgccaactagacaccaacgagtgtgacacgggtgtgtgtgtccat
gcccgctcctgccgtaatctgattggtggatacctgtgcgattgcctgccaggctgggcg
gggcctacctgtgacgtcaggaacagcagctgccaggggttatgtctaaacggaggtcac
tgtgaggactctgtgtcaggctcacactgcctgtgtgtacccagtttctctgggaagcac
tgccagactggccccagtccctgtgacagcaccccctgtcagcacggaggccagtgtgtg
gacacggagggcagggcggagctgtgtagctgtcccatgggctactcagggacgtactgc
gagatggtggtggatctgtgcaatcccaacccatgccagcagggggtgccctgtcagagc
accgacggggggtacacgtgtgcctgccccgagggttactatggtaatgagtgcacgagc
cttaaggacccttgtcatggccaacactgtccaggtgccatgtcagacccggctcgtgga
ggggtccatctctacatggtgttggtgggagtgtcagcgttagtaacggcgtgcggctgc
gcagcctgcgccctcctcctctcccgtctccaccgacgacggaaaaagacacagggcggg
ccccaggaggagggcatcaacaaccagagagagttcgtcaccctcgtccgaaacctggac
cgccccgcgcccctcctgccccctctcacccccaacaccaccgcccacacccctgtccct
gtccctgtacctcgcttctgcgaagagatcgagctcactctgccccctccccggccccct
cacacccctcccctgcactcaaaccatcaaaccacgcgcccaaacaggacatctccaacc
gtgagagggagaagctcaaccgcttccactactcagacaaacaggaactggaggtgtgac
ctttggacctttcaaccgtctagaggcttttattattttgcgcccgcttctctctga
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