Oncorhynchus tshawytscha (Chinook salmon): 112267373
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Entry
112267373 CDS
T05605
Name
(RefSeq) SID1 transmembrane family member 2 isoform X1
KO
K26112
SID1 transmembrane family member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267373
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
RNautophagy/DNautophagy
112267373
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Gene cluster
GFIT
Motif
Pfam:
SID-1_RNA_chan
DUF4369
Motif
Other DBs
NCBI-GeneID:
112267373
NCBI-ProteinID:
XP_042153145
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Position
LG14:25655221..25687564
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AA seq
866 aa
AA seq
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MVLRSCCKFGPVLVWFRLGYVVLLWLCVTHLRCARAETKTVVQKDAEFDVTYNDTVTSDN
QIIYAFNHTVSRNKTEGVRVTVDVLSEGAESSPILFVVRQKQAVLSFQVPLILRGLYQRK
YPYAHVGRTLCQPPTRSLTETQYFFVDVSTLSSLGTHYQLRISRVDSFTLHTDKKFSFTA
SPSQPQYFKYVFPDGVDTVIVKVNSEMTFPCSVMSIQDIQCPVYDLDNNVAFIGMYQTMT
KTAAITVQRKDFPSNSFYVVVVVKTEDEACGGPLRFYPLRPDELIDAGNRSKTLDVVVSP
AISSDVYVMGMLFCLGIFLSFYLLTFLVACVENKRMHRRREGLLNPADMSPAETASLLGK
PGVTPVSPYEYGSFVDNASTLSSEAITDSIASDANYGYMGQETLKRRPFLTAIHHVAIRI
ERSLESVAGRSRQESLSSIEEDDYDTLADIDSDKNIVRTKKYLCVSDLARKDKRVLSKKY
QIYFWNIATIGVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSN
LGYVMLGLLFLLIVLQRDVIHSRALDRNDLNALECGIPKHFGLFYAMGTALMMEGLLSAC
YHVCPNYTNFQFDTSFMYMIAGLCVLKLYQKRHPDINASAYTAYACLAAVIFFSVLGVVF
GKGNMVFWIVFSVLHILATMLLSTQLYYMGRWRLDSGILRRIVYVIYTDCIRQCSGPMYI
DRMVLLVMGNIVNWSLAAYGLLKTPNDFASYLLAIAICNLLLYFAFYIIMKLRSGERIQC
MAMVCILFTAVVWGFALFFFFQGLSTWQKTPAESREHNRDCIVLSFFDDHDIWHFLSSIA
MFGSFLVLLTMDDDLDNVQRDKIFVF
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggttttgaggagctgttgtaaatttggcccagttttagtctggttccgacttggttat
gtggtcctgttgtggttatgtgtgacccacttgcggtgcgcacgggcagaaactaaaacg
gtggtccaaaaagatgccgaatttgatgttacctacaacgatacggttaccagtgacaac
caaatcatctatgcctttaatcacaccgtctcccgaaacaagacggagggggtccgtgtg
actgtggacgtactgtcagagggggcagagagcagtcccatcctgtttgtggtcagacag
aagcaggctgtgctgtccttccaggtccccctcatactgcgtggactgtatcagaggaag
tacccctatgcccatgtgggccgaacgctgtgccagccccccacccgctccctcaccgag
acccagtacttctttgtggacgtgtccaccctgtccagcttgggcacccactaccagctg
aggatcagccgcgtggacagcttcaccctccatacagacaagaagttcagcttcactgct
tcaccatcacaaccccagtacttcaaatatgtgttccctgacggagtggacacggttatc
gtcaaggtcaactctgagatgaccttcccgtgctctgtcatgtccatccaggacatccag
tgcccagtgtatgacttggataacaacgtggccttcattggaatgtatcaaaccatgacc
aagacagctgccatcactgtccagaggaaggacttccctagtaacagtttctatgtggtg
gtggtggtgaagacggaggacgaggcatgtgggggtcccctgcgcttctaccccctccgt
ccagatgagctcatcgatgccggcaaccgcagtaaaacactggacgtggtcgtctcgccc
gctatcagctcggatgtgtatgtgatgggcatgctattctgcctgggcatcttcctctcc
ttctacctgctcaccttcctggtggcctgtgtggagaacaagaggatgcacaggaggcgg
gaggggcttctgaacccagcggacatgtcgcccgctgagacagcctcgctactgggaaag
ccaggtgtgactccagtctccccctatgaatatggctcctttgtggacaacgccagcact
ttgagctcagaggccatcacagacagcatagcatcagatgccaactatggatacatggga
caggagactttgaaacgcagaccattcctaactgccatccaccacgtagccatccgcatt
gagcgttcgttggagagcgtagcgggtcgtagtcgacaggagtctctgagctctatagag
gaggatgactatgacacattggccgacatcgactcggacaagaacatcgtccgcacaaag
aagtacctgtgtgtgtcggacctcgctcgcaaagacaagagggttctgagtaaaaagtac
cagatctacttctggaatattgccaccatcggtgtgttctacgccctccctgtcatccag
ctggtcatcacttatcaaacggttgtcaacgtgacaggaaatcaggacatctgctactac
aacttcctgtgtgcacaccccctggggaatctgagtgccttcaacaacatactgagtaac
cttggttacgtgatgctgggtctcctcttcctgctcatcgtgctgcagagagatgtcatc
cacagcagagcgctggaccgcaacgacctcaacgcactggagtgtggcatccctaagcac
tttgggctgttctacgccatgggcacagctctgatgatggaggggctgctgagtgcctgc
taccacgtctgccccaactacaccaacttccagttcgacacctccttcatgtatatgatc
gctgggctgtgcgtgttaaagctgtaccagaagagacacccagatatcaatgccagcgct
tacactgcctacgcctgtctggctgctgtcatcttcttctctgtgctaggagtggtgttc
gggaagggcaacatggtgttctggatcgtcttctctgtcctccacatcctggccaccatg
ctgctcagcacccagctctactacatgggtcgctggagactggattctggcatcctgcgc
aggattgtgtatgtgatctacaccgactgtatccgccagtgcagtggccccatgtatatt
gaccgaatggttctgctggtgatgggaaacatagtgaactggtctctggctgcctatggg
ctactaaagacacccaatgactttgcctcttacctgctggccatcgccatctgcaacttg
ctactctactttgccttctacatcatcatgaagctccgtagcggtgagaggatccagtgc
atggccatggtgtgtatcctcttcacagccgtggtgtggggcttcgctctcttcttcttc
ttccagggcctcagtacctggcagaaaacccccgccgagtcccgggaacacaaccgggat
tgcatcgtgctctccttctttgacgaccacgacatctggcacttcctgtcttccattgcc
atgtttggttccttcctggttctcctcaccatggacgatgacttggacaacgtccagaga
gacaagattttcgtcttctga
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