Oncorhynchus tshawytscha (Chinook salmon): 112267389
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Entry
112267389 CDS
T05605
Name
(RefSeq) stAR-related lipid transfer protein 13 isoform X1
KO
K20632
deleted in liver cancer protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267389
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112267389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
Tra1_central
Motif
Other DBs
NCBI-GeneID:
112267389
NCBI-ProteinID:
XP_042153266
LinkDB
All DBs
Position
LG14:complement(30397558..30514776)
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AA seq
1730 aa
AA seq
DB search
MDTALMFTLKVRQSLAMSASPARTFSPQTQPTAQTQIQKQTQPQTLTHQSSSDCAPESSH
DDDSSTESSEDVCLPGPLSLELSKLELDNQDTPQQDREAGCEYNSTGAPGIEGDLAVSTG
GPGGPAESGFDVSPPDPLDLDEIVCPAGLISEPSSVTSPSPDDANNNGLDLHSSSPGAAE
DHCLASNVPSPRIEGDVDVLAPRIEENLEVEDSNRRVESGHTLDANLSGQLENMELGHTS
PRQTETDMELGHTSPRQTETDMELGHTSPRQTETDGELEEESPRWTEADSQPEDYSEGPV
ENRQVPTDLEHTEDNHVSVPLVPTENGHIPTLLVQSETEVSHVTISVVQSEDFSSNPSLV
VSVDNNMDPFTHPSLTLALFEAPLAGLGLCDHPCIIKHKPSSITFSGFTCSPSTCHSTTD
HSVFIKNSSDCRESSSEKDDEGDDEDGDDEDTFPELLQSREFLVSRRRRSSSRDKVVKER
GSISPHAEAPVSSTTNSTASSHLSSSSKNQNHSGCEAETETSSTEESPLVQPQTPWCESM
SQLMRKLDQLNLDIEEALSPSSSPSDTPCTARRQQYGAVSGTAVNQSLNEEDSTLLQRGE
PDTEECLRQDQHKTLATSSSAEGTRARTKKTVMCSKMTNAGAELEAKEACDWLRAAGFPQ
YAQLFEDSQFPIDISPVKKDHDFLDNDLVEPLYRRLNTLNKCASMKLDVNLPKKKSEDSD
EEDLLAISDRWTFEWTSRRWSRLKGEGRSPREGEGRGLRNTTSSESVLTDLSEPEVSSLH
SESSGGSGHQAVSTEDSDCSNRNYSDSAAMPEPDSNSLTLPHLPKHLPYYGSLPTKNNRA
GRTRAKDFLRHMETLRSRGTLDRGRSKMLVISAPVLQMEPQALKMMHCVEITNGDGCRAE
VPTGGPILGLTPQCPSSSEGSHSSGSTVSSPSLKERKPHSQRTDRSDAKRSGMYLEDLAV
FSSLQRNSGVAEHNRHNEFRSYEDLVVHIPKDHKPGTFPKALSIESLSPTLRASVPWHSG
SLNPLEPQSNPNPRPNSNPREFHPRPATQFCPRGSRISVYDNVPGSHLYASTGDLLDMEK
EDLFPHLDDILQHVNGLQQIVDRWSKNILPSAGLDGQGIQPAGMQSSSQITLDFEGTSVL
ERQSTASDRDRDRVSLIETHCTGHRERRDSGVGASLTRPNRLRWPSFQMSNRLSHSVASL
QITNQSAGQLSLLQKFSLLRLTAIMEKYSMSNKHGWTWSVPKFMKRMKVPDYKDKNVFGV
PLIVHVQRSGQPLPLSLQQALRYLRSQCLDQVGLFRKSGVKSRIQALRQMNESSPDDVSY
EDQSAYDVADMVKQFFRDLPEPLLTSKLGETFLHIYQYVPKDQRLQAVQAAIMLMSDENR
EVLQMLLCFLSDVTSSVEENQMTPMNIAVCLAPSLFHLNILKKDNLSPRAMQRKYTTGRP
DQKDLNENLSATQGLAHMIIECNRLFEIPHEMVTQSRNSYAEADLHAPTLEELCRQQEED
DASYQAEARPCQTHSETRPQNLYQSYVESRLQELLKEAREKAKGWVSCTSSDNTELYCKK
VGDGNPLRRWRVAVEVEAPPSVVLNRVLRERHLWDVDLLQWKVAETLDRHAEVFHYVLNR
MPPHPSRDFLVLRSWRTELPKGTCALVCVSVEHEDCPRVGGVRAVVLESNYLLEPCGSGK
SRLTHICRVDFKGRSPEWYNKAFGHLCAAEAARIRNSFQPISTEGPETKI
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggacacagctctgatgtttactcttaaggtgcgacagtctctggccatgtcagcatca
ccagccaggaccttctcaccacagacacagccaacggcacagacacagatacagaaacag
acacaaccacagacactaacacaccagtcctcctcagactgtgctccagagtcttctcat
gatgacgacagctccacagagagcagtgaggatgtctgtctgccaggacctctaagcctg
gagctgtcgaaactggaactagacaaccaggacacaccccagcaggacagggaggcaggt
tgtgaatataacagtactggagcccctgggatagagggagatctagctgttagtactgga
ggtccaggagggccagcagagtctggttttgatgtctccccccctgacccactagaccta
gacgagatcgtctgtcccgcgggtctaatcagtgagccaagcagtgtcacatcaccatcg
cctgatgatgccaataacaatggattggatttacacagcagttctccaggagcagctgag
gaccactgcctagcctccaatgttccttctcctaggatagagggagatgtggatgttctt
gctcctaggatagaggaaaacctggaagttgaggacagtaacagacgtgtagaatcagga
cataccctggatgctaacctctctggtcagctagagaacatggagctggggcatacctca
cccaggcagacagagacagacatggagctgggccatacctcacccaggcagacagagaca
gacatggagctggggcatacctcacccaggcagacggagacagacggggagctagaggag
gagtcacccaggtggacagaggcagacagccagcctgaggactactcagagggacctgtg
gagaacagacaagtccctactgatctggaacacacagaagacaaccatgtctccgtccct
ctagtcccaacagagaatggacatatccctacccttctggtccaatcagagacagaggtc
agccacgtcactatctctgtggtccaatcagaggattttagctccaacccttctctagtg
gtcagtgtagacaacaacatggatcccttcacacatccctcccttaccctggccctattt
gaggcccccttggcagggctaggcctctgcgatcacccctgcatcatcaaacacaaacct
agctccatcaccttctcaggcttcacctgtagtccctccacctgccactctaccaccgac
cacagcgtcttcatcaaaaacagctctgactgcagggagtcttcctcagagaaggatgat
gaaggtgatgatgaagatggggatgatgaggacacattcccagagctgcttcagagcagg
gagttcctggtcagtcggaggagaaggagcagcagcagagacaaagtagttaaggagaga
ggatctataagtccccatgcggaggcaccagtcagctctacaaccaactctacagccagc
tcccatctctcctcctcctccaaaaaccagaaccacagcggctgcgaggcagagactgag
accagcagcacagaggagtctcccctggtccagcctcagaccccgtggtgtgagtctatg
agccagctgatgaggaaactggaccagctcaacctggacatagaggaggctctgagtcca
tcatcctccccctcggacacaccctgcaccgcacgcagacaacagtatggagctgtgtct
gggacggcagtaaaccaatctcttaacgaggaggacagtacactgctgcagcgaggggaa
ccagatacagaagaatgtctcagacaggaccaacacaagaccttggccactagtagctca
gccgaaggaaccagagccaggaccaagaagacagtcatgtgcagtaagatgaccaatgca
ggtgcagaactcgaggcgaaggaggcgtgtgattggctacgagcggcaggattcccccaa
tacgctcagctctttgaagactctcagttccccatcgacatctctcctgtgaagaaagac
catgactttctggacaatgacctggtggaacctctctacagacgactcaacaccttgaac
aagtgtgcctctatgaaactagatgtcaaccttcctaagaaaaagagtgaagactctgat
gaggaggacctgcttgccatcagtgacagatggacgtttgagtggacgagccgccgctgg
tccagactaaagggggaggggcggagtcccagggagggggagggccggggcctgcggaac
actaccagtagcgagagtgttctaactgacctcagcgaaccagaggtctcatctctccac
agtgagagcagcggggggagtggccaccaggctgtgagcacagaggactcagactgctct
aaccggaactactctgactctgcagccatgcctgaacctgactccaactcccttaccctg
ccacacctccctaagcacctcccctattacggttcgttgcccaccaaaaacaaccgtgcc
ggacggacccgagccaaggacttcctgcgccacatggagacgctacgttcccggggcacg
ttggatagggggaggagcaagatgctggttatcagcgctccggtactgcagatggagccg
caggccctgaagatgatgcattgtgtggagatcaccaatggggacgggtgtagggcggag
gtacccactgggggaccaatcctagggctaaccccccagtgcccctccagtagcgagggc
agccactccagcggcagcaccgtctcctcccccagtctgaaggagaggaagccccactcc
cagcggacggaccggtctgacgccaagcgcagtggcatgtatctggaggacttggccgtg
ttctccagcctgcagcggaacagtggcgtggccgaacacaaccggcataacgagttccgc
tcctacgaggacctggtggtccacatacccaaagaccacaagcctggcacctttcccaag
gccctgtccatagagagcctctcccccaccctgagggcctccgtcccctggcacagtggc
agcctcaatcccctggagccccagtccaaccccaacccccgacctaactctaaccccagg
gagttccacccccgccccgccacccagttctgcccacggggcagtaggatcagtgtgtac
gacaatgtccctgggtctcacctctatgcctctactggagacctgttggacatggagaag
gaagacctattcccccacctggatgacatcttgcagcacgtcaacggcctgcaacagata
gtggaccgctggtccaagaacattctgccctctgcaggcctggacggacaggggatccag
cctgcaggtatgcagtcttccagccagatcacgctggactttgagggaacgtctgttctg
gagagacagagcacagccagtgacagggacagagaccgtgtgtcactcattgagactcac
tgtacaggacacagagagaggagggactcaggagtgggagcatcgctaaccagacccaac
cgtctgcgatggcccagcttccagatgtccaaccggctcagccactcagtggcctcgctc
cagatcaccaaccaatcagcaggccagctcagcctgctgcagaagttctctctcctccgc
ctcactgccatcatggagaaatactccatgtccaacaaacacggatggacctggtcagtt
ccgaagttcatgaagaggatgaaggttcctgactacaaggacaagaacgtctttggtgtt
cctctgattgttcacgtccagcgctctggtcagcccctccccctcagcctgcagcaggcc
cttcgatacctcaggagccagtgtctagaccaggtgggtctgttccgtaagtctggtgtg
aagtctcgtatccaggcgctgagacagatgaatgagtcgtctcctgatgatgtcagctac
gaggaccagtcagcgtacgacgtagcagacatggttaaacagttcttcagagacctgcct
gaacctctactgaccagcaagctgggagagaccttcctacacatctaccagtatgttcct
aaggaccagcggttgcaggctgtgcaggcggccatcatgctgatgtcagacgagaacagg
gaggtgctccagatgttgctctgcttcctgtctgatgtcacttcctctgtggaggagaac
cagatgactcccatgaacatcgctgtgtgtttggccccatccctgttccacctcaacatc
ctgaagaaggacaacctctcccccagggccatgcagaggaagtacacgacaggccggccc
gaccagaaggacctgaatgagaacctttccgcgacgcagggactcgcccacatgatcata
gagtgcaaccgactgtttgagattcctcacgagatggtgactcagtccaggaactcgtac
gcggaggcggaccttcacgctcccaccttagaggagctctgtagacagcaggaggaggac
gatgcgtcctaccaggcagaggccagaccctgccagacacactccgagaccagaccgcag
aacctgtaccagagctacgtagagagcaggctgcaggagctcctgaaggaggccagagag
aaggctaagggctgggtgtcctgcaccagctcagacaacactgagctctactgtaagaag
gtgggtgatgggaaccctttgcggcggtggcgtgtggcggtagaggtggaggcccctccc
tcggtggtgttgaaccgcgtgctgcgagagcgccacctgtgggacgtggacctgctgcag
tggaaggtagctgagactctggacagacacgctgaggtgttccactatgtcctcaaccgc
atgccaccacaccccagcagagacttcctggtcctacggtcatggaggactgaacttccc
aaggggacgtgtgcattggtgtgtgtgtctgtagaacatgaggactgtccccgggtcggt
ggggtaagggccgtggttctagagtctaactaccttctagagccctgcggctctgggaaa
tccagactcactcacatctgcagggtggacttcaaagggcggagtccagagtggtacaac
aaggcctttggtcacctctgtgctgctgaagcagctcgcattcgcaactccttccaacca
atcagcacagaggggccagagaccaagatctga
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integrated database retrieval system
