Oncorhynchus tshawytscha (Chinook salmon): 112267416
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Entry
112267416 CDS
T05605
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112267416 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112267416 (rsf1a)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
112267416 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
112267416
NCBI-ProteinID:
XP_042152495
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All DBs
Position
LG14:complement(30774569..30792521)
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AA seq
1385 aa
AA seq
DB search
MAALAAAQGSNPGLCPSFAVVCSFLERYGQALDLPELTFPQMERYLRDTSTVPKPLVELH
VKLLRKLGKSVSADKWERYLAKVCQDINSSWAWELEHKGYQDLSMECKTSILKYLCEIQF
DDNLKFKTLVNEEEAEAMRLQPLGRDRQGLMYWLQTDAQHNIRLYTEEQDDWDGSTWRCI
VRTRNDLADALDLLKTQLDPEHKEKEEGETERKKEMDREKEGGSNFAKPVERGRRHTEEG
MGSVLQYNMSTSVMIFQGEAGGEVKEEEEEDEEKARQKRKAEEDKNKSKEREKEEEEDKR
EKSRSSTYPESTSTDDNMASLAEKENPTKSEPLFSVKEENIAVEMKEEKEMKKCDEKEEG
ETQSVRKEERSEVIDNRVSTITALVKEETQMLNNSPSNAVSVVMAPVSATTKQEVPPVKE
EAERALRTDQQAKIPLKKRELFGANRHHSNTHHNNDMHSNQHNNNSHSSSTSSSIIVRNP
SVTHTKEEQLGRQSAPPGGLAVPLPEELTNGGAPLNGLGGLTGGIGHVGVICRSASQQQD
GGLFCTDRTRPGAEEGAERASAPDKERSRQSVLVRKSPGWGETGAPTPLEPRGQERQAGG
EERERKEKGERSRERLGEDGIEKVRERLDGDLSGERDDNTKEKEEKEKKTTLHMEKSEGC
HGTEEEEKKSTSGKKEQESESSQTVEGQRDQGEALSTDTPANARVRGAGHGAADRPGPLE
ASSELQKEGIRLKIKIPPNQRIENVREEEEKAEEQGDGRSLRRSARICRPSPNKVKSQDA
PPGVRREEEEEKTAQWQKKRANPEGQSRTVKSRRRQRGPRWSNTRAKRCKPNEGGEEGEE
RGRKEERGREGSICDSDDSSQSEEMPNEDPCSHCGLPNHPELILLCDSCDSGYHTACLRP
PLMVIPEGEWFCPPCQHKLLCDRLEEQLQNLDCALKKRDRAERRRERLVYVGISVENIIP
QEGEEEEEKLVKKKDAKNTKNLGRRSTRTRKCISYRFDDFDDAIDEAIEEDVRDEDGGEV
GQGKDIATILSEEGKEKRGPTTAQAPPTRSRKRRRLNDLESDSTAAESEEEFQLSASTEE
EEFVASGDEEAASDVDSFASDPGFVSQSTRAQRRAPKQRTSRTAAKCKKHPRRQRRGWGE
EEEESEEEEEEEMETSDLSDSDGDRKRCGLRRGRKREVNYRETSESECSQATTNKDKAKP
RRRRLSSSNSDESSHSRESEEEEKRMRGKRRREEVEESRTRGKKRRGETMGRGKRRKVLI
EQRRKRLALLKKSRPSTKDDEDDNDEGESESSSEEDRPIRKRLNRIDSDEEEEKEGKNEE
DEEEEEKKLRKPSSKDKESNSPNGQQASRGSTQPGSESAALPRDRAARAGQNRSNSPPPP
DQSDA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttagcggcagcgcagggctcaaaccccggtctctgccccagtttcgcagtg
gtctgctcgttcctggagcgctacggacaagccctggacctccccgaactcacgtttccg
cagatggagaggtatctccgggacacatcgacagttcccaagccactggtggagctgcat
gtcaagctcctgaggaagcttggcaagtctgtgtctgcagacaagtgggagaggtacctg
gctaaggtatgccaggacatcaacagtagctgggcttgggagctggaacacaagggctac
caggatttgagcatggagtgcaaaaccagcatcctcaaatacctgtgtgagatccagttt
gatgacaacctgaagttcaagacgttggtgaacgaggaggaggcggaggcaatgaggttg
cagcccttgggcagagacagacagggtctgatgtactggctgcagactgacgcccaacac
aacattcgcctgtatacagaggaacaggacgactgggacggatccacctggagatgtatc
gtcagaacccggaacgacttggccgatgctctggacctcctgaagacccagctggaccca
gaacacaaggagaaagaggagggagagacggagagaaagaaagagatggacagagagaag
gagggaggatccaactttgccaaacctgtggagagggggagaagacacacagaggagggt
atgggttctgttctgcaatataacatgtcaacatctgtgatgatttttcaaggtgaggct
ggaggagaggtaaaggaggaggaagaggaggacgaggagaaggcaagacagaagaggaag
gctgaggaagacaagaacaagagtaaagagagagagaaggaggaagaggaggataagcga
gaaaagagtagatcatctacctacccagaatccactagtacggatgacaacatggcatcg
ttagcagagaaggaaaacccaaccaaatctgaaccgttattctcagtgaaagaggaaaac
attgcagttgagatgaaggaagaaaaggaaatgaaaaaatgtgatgagaaagaagaggga
gagacacagagtgtgaggaaggaggagaggtcagaagtgattgacaacagagtgagcacc
atcaccgcgctcgtcaaagaggagacccaaatgcttaacaactcccctagcaacgctgtc
tctgtcgtcatggcgcccgtctcggcaacgacaaaacaggaagttcctcctgtgaaggag
gaagcggagcgggccctgaggaccgaccagcaggccaagataccactgaaaaagagagag
ctctttggcgctaaccgtcatcatagcaacacacatcacaacaatgacatgcacagcaac
caacacaacaacaacagccatagcagcagcactagcagtagcatcattgtccgtaaccct
tcagtaacacataccaaggaggagcagctggggaggcagtcagcgccacctgggggccta
gctgtcccactgccagaggagctgaccaatgggggggctcccctaaatgggcttggaggg
ctcacagggggtataggtcatgtgggggtcatctgcaggtcagcctcgcagcaacaagat
ggtggattgttctgtacggacagaaccagacctggggcagaggaaggggctgagagggcc
agcgctccagacaaggagaggagcaggcagtcagtcctggtgaggaagagtcctggctgg
ggagagactggagccccaacacccctagagcctagaggacaggagagacaggcaggagga
gaggagagggaaaggaaggagaaaggagagagatccagggagagattaggagaggatgga
attgagaaagtgagggagaggttagatggagacctgtctggagagagggatgacaacaca
aaagagaaagaagagaaagagaaaaagaccaccctccatatggagaaaagcgagggatgc
catggaacagaggaagaggagaagaagagtacttcaggaaagaaggagcaggagtcagag
agcagccagactgtagaaggacagagggaccagggagaggccctcagcacagacacacca
gccaatgccagggtgaggggagctgggcatggagcagcagaccggccgggtccccttgag
gcctcctctgagctgcagaaagaagggatcaggctgaagataaagatccctcccaaccag
aggatagagaacgtgagagaagaggaggagaaggcggaggagcagggagatgggaggtct
ctgcggagatcggctcggatctgcagacccagcccaaacaaggtgaagagccaagacgca
cccccaggagtgaggagggaagaagaagaggagaagactgctcaatggcaaaagaagaga
gcaaaccctgagggacaaagcaggactgtaaagagcagaagaaggcaacgaggcccccgc
tggtcaaacactcgagcgaagagatgcaaaccgaatgagggaggagaggagggggaggag
agagggagaaaggaggagagagggagggagggaagtatttgtgactcagatgactctagc
caatcagaggagatgcctaatgaagatccctgcagccactgtggacttcccaaccacccc
gaactgatcctgctgtgtgattcatgtgatagtggttaccacaccgcctgcctcagaccc
cctctcatggtcatacctgagggagaatggttctgcccaccctgccaacacaaactgctg
tgtgacagactagaggagcagctgcaaaatctggattgcgctctgaagaaaagagaccga
gctgagaggaggagggagcgtctggtgtatgtgggaatcagtgtggagaacatcattcct
caggaaggggaggaagaagaggagaaactggtgaagaagaaagatgcaaaaaataccaaa
aacctgggaaggaggtctaccagaaccaggaagtgtatcagctacaggtttgatgacttt
gatgacgccattgatgaagcgatagaggaagacgtcagagatgaggatggaggagaggtg
gggcagggtaaggacattgccaccatcctatcagaggaggggaaggagaaacgaggacca
accacagctcaggcccctcccaccaggagcaggaagagaaggagactcaacgacctggag
agcgacagcacggctgcagagagcgaggaggagtttcagctcagcgccagtacggaggag
gaggagtttgtagcgtcaggtgatgaggaagcagccagtgatgtggacagctttgccagc
gacccgggcttcgtaagccagtccacacgggcacagagacgggcacctaaacagagaacc
tccaggaccgcagcaaagtgcaagaaacacccacgcagacagaggagaggatggggggag
gaggaggaggagagtgaagaggaggaggaagaggagatggagaccagtgatttgagtgac
agcgatggggacaggaagaggtgtggtttaaggaggggccggaagcgggaggttaactac
cgcgagacgtcagaatccgagtgttcccaggcaaccaccaataaggataaggctaaaccc
cgccgccgtcgtctctccagctcaaacagcgatgaatcctcccattcgagagagtctgag
gaggaagagaagagaatgaggggaaagaggcggagagaagaggtggaggagagtagaaca
aggggaaagaagaggagaggagagacgatgggccgagggaagcggaggaaggtgttgata
gaacagcggaggaaacgtctcgctctgctgaagaaaagcagaccctccactaaagatgat
gaggatgataacgatgaaggggaatcggagtcatcatccgaggaagatcgtcctatccgc
aaacgacttaaccgcatcgactctgatgaagaggaggagaaagagggaaaaaatgaggag
gacgaggaagaagaggagaagaagctgagaaagccgtcatcaaaagacaaggaatcaaac
agccctaatggacagcaggcctctagaggctcaacacagcctgggtctgagagtgcagcc
ttacccagggacagagcagccagagctgggcagaacaggtctaacagccccccacctcct
gaccagtcagacgcatga
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