Oncorhynchus tshawytscha (Chinook salmon): 112267450
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Entry
112267450 CDS
T05605
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00061
Fatty acid biosynthesis
otw00071
Fatty acid degradation
otw01100
Metabolic pathways
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04146
Peroxisome
otw04216
Ferroptosis
otw04920
Adipocytokine signaling pathway
Module
otw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112267450
00071 Fatty acid degradation
112267450
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112267450
09143 Cell growth and death
04216 Ferroptosis
112267450
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112267450
03320 PPAR signaling pathway
112267450
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
otw01004
]
112267450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112267450
Enzymes [BR:
otw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112267450
Lipid biosynthesis proteins [BR:
otw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112267450
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of breast milk
112267450
Exosomal proteins of breast cancer cells
112267450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112267450
NCBI-ProteinID:
XP_042153507
UniProt:
A0AAZ3SJG3
LinkDB
All DBs
Position
LG14:complement(43319441..43364499)
Genome browser
AA seq
717 aa
AA seq
DB search
MKLKEDLNPVLLLLFQVTVWLYSVLAFLPSYLFSSVSESDAGLGSEQERAQRLKARSVTG
HPAGPYRAMGATKRLVSSLHPGVDTLDKVFEDASRRFPDRDCLGTREVVMEEDERQSNGK
FFKKVILGQYRWLSYAETHRAAACFGIGLAALGQRAHNNIAIFCETRAEWVIAAQACFMQ
NFPLVTLYSTLGGPAITHGLNETEVSHIITSRELLETRLKFILLEVPRLQHIIVVDDTPT
EWPGYPRGISVHNMANVQGLRTKPENVCQGHKQPMPSDIAVIMYTSGSTGVPKGVMISHS
NIIAGITGMAERIPNLGENDTYIGYLPLAHVLELSAELVCVAHGCRIGYSSPQTLADQST
KIKKGSKGDTSVLQPTLMAAVPEIMDRIYKNVMTKVEEMSSAQRTLFTLAYNYKLEQLSQ
GRSTPLCDNLVFKKVRSLLGGKTRVLLSGGAPLSAATQRFINVCFCCPVGQGYGLTETCG
AGTISEMWDYSTGRVGGPLICSEIKLKDWVEGGYHITDTPTPRGEILIGGPNVTMGYYKN
EAKNQDFFVDENGQRWFCTGDIGEVHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKN
CPLIDNICAYANSDEMYVIGFVVPNQKHLLLLAEQYLIRGSWEELCDNAAMEEVVLQVIT
EAALSAQLERFEIPRKIRLSPDPWTPESGLVTEAFKLKRQQLKSKYQDDIERMYGGK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaagaggacctgaacccagtgctgctgctgctcttccaggtgacggtgtgg
ctgtactctgtcctagccttcctcccctcctacctcttcagctctgtgtcagaatcagac
gcaggcctcggctcagaacaggagcgggctcagagactcaaggcccggtctgtgacgggt
caccccgcggggccctacagggccatgggcgccacgaagaggctggtgtcgtccctgcac
cccggggtggacacactggataaggtgtttgaggacgcatccagaaggttccctgacaga
gactgcctgggcaccagagaggtagtcatggaggaggatgagaggcagagcaacggaaag
ttcttcaagaaggtgatccttgggcagtaccgctggctgtcctatgctgagacccacagg
gcagcagcctgctttggcattggtctggcagcgcttggccagagggcccacaacaatatt
gccatcttctgtgagaccagggccgagtgggtaatagctgcacaggcctgcttcatgcaa
aacttccccttggtcactctgtactctaccctggggggtccggccatcactcatggtctg
aacgagacagaggtcagtcacatcataaccagccgagagctactggagaccagactcaag
ttcatcctgctggaggtgcccaggctgcagcacatcattgtggtggatgacacgcccacc
gagtggcctggttacccacgaggcatcagtgtccacaacatggccaatgttcaggggctg
cggaccaagcctgagaatgtgtgtcaggggcataaacagcccatgccctctgacatcgct
gtcatcatgtacaccagcggctccactggcgtacccaagggagtcatgatctcccatagc
aacatcattgctggcatcactggcatggcagaaaggatacccaacctgggtgagaatgac
acctacatcgggtacctccctctggcccatgtgttggagctgagtgcagagctggtgtgt
gtggctcacggctgcaggatcggctactcctccccccagacactagcggaccagtcgaca
aagattaaaaaaggcagcaaaggagacaccagtgttctgcagcctactctaatggcagct
gtgccggagataatggatcgtatctataagaatgtgatgaccaaggtggaggagatgagc
agtgctcagaggactctgttcactctggcctacaactacaagctggagcagctctcccag
ggacgcagcacaccactgtgtgacaacctagtgtttaagaaggttcggtccctactgggg
gggaagaccagggtgctgctgtcaggcggggcgcccctctctgccgccacccagcgcttc
attaatgtctgcttctgttgccccgtgggccagggctatggcctcaccgagacctgcgga
gctggaaccatcagcgagatgtgggactacagtacagggcgagttggagggccactcatt
tgttctgaaatcaagctcaaggattgggtggagggtggctaccacatcacagacacgccc
accccacgaggtgagattctgattggcgggcccaatgttaccatgggttactacaagaac
gaggccaagaaccaggacttctttgtggatgaaaacggccagcgctggttctgtacggga
gacataggagaggtccatcctgatggatgcctcaagatcattgatcgtaagaaggacctg
gttaagctccaggcaggagagtatgtgtctctggggaaggtggaggccatgctgaagaac
tgcccccttatagacaacatctgtgcctacgccaacagcgatgagatgtacgtgattggc
tttgtggtgcccaatcagaagcatctgcttttgctggcggagcagtatcttatccggggc
tcgtgggaggagctgtgtgacaacgctgccatggaggaggtggtcctgcaggtcatcacc
gaggccgccctatcagcccagctggagcggtttgagatcccccgtaagatccgtctgagc
cccgacccctggacccccgagtcgggcctggtgaccgaagccttcaagctcaaacgccag
cagctgaagagcaagtaccaggacgacatcgagagaatgtatggcgggaagtag
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