Oncorhynchus tshawytscha (Chinook salmon): 112267475
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Entry
112267475 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 17
KO
K20689
Rho guanine nucleotide exchange factor 17
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267475
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112267475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
RhoGEF
PH_19
BBS2_Mid
Herpes_UL14
Motif
Other DBs
NCBI-GeneID:
112267475
NCBI-ProteinID:
XP_042153585
LinkDB
All DBs
Position
LG14:complement(50951194..51058625)
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AA seq
2589 aa
AA seq
DB search
MAEKEKVYRSVSFKKLGCSANKSCCEEQLNKTTNLEGSSSALPPPSTAAAEKAQPSAMRN
VSVSRKVSKISAASLPTAELKKGSSTPLSSISPSIRQLTEKFSSTNSSRTHGAPSPGSNV
VGKSTTLPRVKSNRGEGSPSRKSFHEDSGYLQVTDTVLTVSPNDTKVHEQKFYSGTDSVS
GSDSERNQKWMYTRISPQGSVGAGKIDDSHVDPPVSYDNNCSKISNTEDYVVSGAPACKS
HRSYFPSHHGDPPVHVDLTYWPSVTKIRELFDAEDLKCSNQRQPSASSKDNSLADISDRQ
SPNSPTPEATSLSGSDRHLSRAASRGRERRHQGMDSAFHPDQHYSDDAEIEPASTSIRRS
GRFLRVAQPSNTHRAHSPSSGGEGPETWTSSLNSDPPPSVLTAAPAPPPRSNSSGLSSSR
VRPSGEQRQSRGAGQPTDSLHSSHSSSRPVAPSSDRASARAAITARWRFSSGDEEEDYHH
RAGGRSPQSLGVSGGYLSRGKNGWWGGKVLGRSSGSEEDSPASLGPSRDAVRRRSLRKKK
NNEVAVATGRDDGESDDSDDEQTGMMEHLERHQQNITAEQTGSSRNRLREPKASSTCAAL
WGRNSTPNQMGAQGSYRRKYTSVGAGTSRITTPLSGVSRVSKVNISSFISSPGGSQSSSR
YCSTETLKEEDQASYANRRVNCNVTTPGSVVGASSSMLSKTYHGNFTMYRSPSFGHGDNF
SHAPVRGQPRILPPVNPPSPATGDTGGVAREETTVFRRLLSGGVVGDKDKNRMSLSNPDI
ASETMSLLSFLKSDLSDLRVRKTDRSGVIEGSSTVYRMGSRGLYPGLRPSLKDLTATLRR
AKSFTYSDKPVGRQHPAGSSAKRSSSEQCLDQDEERDGGRGAVPDREVESDGGDCRAGGY
GYEDVMPTPLQDRYVQEARQVIRDICQMSALEDVDNGDDDDVLATDGTEDECFKRKQVEE
QEIKEGEGGELKDERRAREAEVAISGEKEMREWDCENTEREKFQQKGDSEENVFYDRSVD
ELSGHESSLTDEGIVTEPEAGLGDPERLFVRSSLGSSLARDVLGQPLTIWKQSALHEDEW
PGLHEGLREGSGLNEGMREGSGLNGGAREKRENPVSVPALGVESESIAVVTEMSGVNNNN
STSGRANVSQGASVPGLEAPPTPSAIRRRRKFSSTGNAGSDSSNGSTGESNGNGDVYRSL
SDPMPHRRRSVSEEGNNSFSLDSNLLGSLSLSSKGAGGVGGGSVPESSSTADLSECTGSV
ASDLSLCSDGGLRDDYSNVIRNIVAEPGAMDRLMTDDKNNGKATKKKSFSDPSRRGDGPL
LDEPGFKSHYHPKEPVSELDQPGQIPPSSSEPILSEQRDELWELRDECGHPLLSRHGNNE
VGKFRSQSEREVHSCLHSDDTDRVGGGEILNSDLKLAELVSPGMGRRTNRKRPNWVTQSA
SEEPDHSEPGPEDQDQDQTDLTPPLPLVPPKPKTRSKHVRHASEPATFIPIFPPPQPQRA
QGDPPSLLPACELSILGKPTSEEAPSLEDVTKRYILALNAPGGESEPSGSESGSRGTVPV
PDGSNSSPATPSGAREPRLQRKSSEELTTPAPQSAKPRVDMRRHVVMTLLDTEQSYVESL
RTLIQGYMRPLKQPDSGSLVDPSLVDEMFYQIPEILEHHEHFLEQVTGCISQWHDRQTVG
QLLIQSFSKEILANIYSAYIDNFLNAKDAVRIAKEAKPAFLKFLETSMRENKEKQALGDL
MIKPVQRIPRYELLVKDLLKHTPEEHPDHPLLLDAQRDIKRLAEKINKGRRSAEEVERET
RVMQEIEAHIEGVEHVRDILNPMRKFLRQEMVMEAKTVGGKKDRSLFLFSDLLICTTLKR
KSGSLRRSSMSLYSVASVIDTSSKYKFLWKLPLEDVEMVKNPSQATNKETIQKMIGRLDE
DLSTLGQISKLSETLSFPHQSLDDVIKDLMSSVHRELAEKQSLAFSMSFLPTKLELTTAS
AETSFVFEFSSPDTRSNFQQAFEDAKKKLAMNKDQWDPEFLKAIPIMKTRSGMQFSCASP
SHSCPESSSEVWVCNSDGYVGQVCLLNIRDQPTVEACIAVCSARIICIAAVPGLKGRERG
VEHSSAPPPVAVDSTPFRQQQLHISISHSSLELTKPPSGAGPELVPFDSDDTDDEDSPSP
SSTLQSQASHSTVSSSYGNEEGSGSKDMATETTSSEEEQDYPVASSYGAPGRPGGGGIGR
PHSESPMDGRAMRRSSRGSFTRASLEDLLSIDPEAYQSSVWLGTEDGCIHVYQSSDNIRN
RKNSMKMQHSAPILCVLYLDNKVFASLANGDVIVYQREVGSFWDAQSSQTLSLGTPSSPV
TKMVPVGGKLWCGSQNRVLIINTTTLVQEHWFQVGTDSSRCVTCMVSYGQGVWLALQGSA
QIRLYHAQTWDSLTEVDVAPAVHKMLAGSDAIIRQHKAACLRITALLACKDLLWIGTSAG
VVLTLSIPAVSSGTVSGTLRSPLTPMGSAHGHTGHVRFLTSIELPEGFDVNFPLPADTTG
NPAQSGVEGGNGGLQRRDSARRRASALLPVKTNQLVISGGDGYEDFRLTNSSETVGRDDS
TNHLLLWRV
NT seq
7770 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaggagaaggtgtatcgcagtgtttctttcaaaaagttaggttgtagcgcg
aacaaaagttgctgtgaagaacaactaaacaaaacaacgaatttggagggtagtagcagc
gcccttccccctccatctacagcagcggccgagaaagcgcagccctcggctatgcgtaat
gttagtgtgtcaaggaaagtttccaaaatctccgctgccagcctcccaaccgcagagcta
aagaaaggctcctccactcccctctcctccatttctccctctattcgccaactcactgag
aagttcagtagcactaattcgtctcgaacgcatggagctccgagccctggcagtaacgtt
gtcgggaaaagcacaactttacccagggttaaaagcaacaggggagaagggtccccatct
cggaaatcattccacgaggacagtggatatttacaagttactgacacggttttaacagtg
tctccgaatgacactaaagttcatgaacaaaagttttattcgggcacagactcggtctct
ggatcggattcggagagaaatcaaaaatggatgtatactcgcatttctcctcaaggcagc
gttggggctggtaaaatagatgattcccacgttgatccgcctgtctcttatgacaacaac
tgcagtaagatttcgaacactgaggattacgttgtcagtggggcgcctgcctgcaagtca
cacaggagctatttcccaagtcaccatggagatcctcctgttcacgttgacctaacctac
tggcccagtgtcaccaagatcagagagctttttgatgcagaggatttaaagtgttctaac
cagcgccagccctccgccagctctaaagacaactctttagcagacataagcgacaggcag
tctcccaacagcccaacccctgaagccactagcctgtcagggtcagacagacacctcagc
agggctgcctcccggggcagagagaggagacaccagggcatggactcagcctttcaccct
gaccagcactactcagacgacgcagagattgagccagccagcactagtattcgtagaagt
ggtaggtttcttagggtggcccagccatcaaacacacacagagcccacagccccagcagt
ggaggagaggggcctgagacctggacttctagtctgaactctgaccctccaccctctgtc
ctcaccgctgcacctgcccccccacctcggagcaactccagtggcctctcctcctcccgt
gtccgcccctctggagagcagaggcaaagccggggggccggacagcccacggacagttta
cattcctcacatagctcctccagaccggtggccccctcctctgatagggcctcagccagg
gcagccatcacagcccgctggaggttcagctcaggagacgaagaagaggactaccaccac
cgagcaggaggaaggagccctcaatcgttaggtgtcagtggaggttacctctcccgcggt
aagaatggctggtggggtggtaaggtcctcggcaggtcttcaggcagtgaggaggacagc
cctgcttcactaggacccagcagagacgccgtgagacgccgctcactgagaaaaaagaag
aacaacgaggttgccgtagctacggggcgagacgatggcgagtcagacgacagtgacgac
gagcagacgggtatgatggaacaccttgagagacaccaacagaacatcaccgcagaacag
actgggagctcccggaaccggctcagagaacccaaagcctctagcacctgtgcagcactg
tggggacgcaattccactcctaaccagatgggagctcaggggagctacagacgcaaatac
acatcagtcggggcggggacatctcgcataaccacacccctatcaggggtgtcgcgggtg
tcaaaggtcaacatttcatcatttatttcgagtcccggcggctcgcagagcagcagtaga
tactgtagcaccgagacgctgaaagaagaggaccaagctagctatgctaacagaagggtg
aactgtaatgttactaccccaggcagtgtggttggtgcttcctcttccatgctcagtaag
acctaccacggtaacttcaccatgtaccgctcccccagcttcggacacggggataacttt
tcccacgcccctgttagaggccaaccccgcattcttccccctgtcaatcccccatcccca
gccacaggggacactggaggggttgctagggaggagactacagtgttccgtcggttgcta
agtggtggcgttgtcggtgataaggacaagaacaggatgtcattgtcaaacccggacata
gcctcagaaactatgtctctcctcagcttcctgaaaagtgacctatcagatctcagagtt
cgaaagacggacaggtcaggggttattgaggggtcatctacggtgtacaggatggggtca
agaggcctctacccaggactccgcccttcattaaaggacctcactgcaactctcagacgt
gccaaatccttcacttactctgataaaccagtagggaggcaacatccagccggctcctct
gctaaaagaagctcttctgagcaatgtctggatcaagacgaagagagggatggagggagg
ggggcggtgcctgacagagaggtggagagtgatggaggagactgcagagcagggggttat
gggtatgaggatgtgatgcccactccgttgcaggaccggtatgtccaggaggccagacag
gtaatcagagatatctgccagatgagcgctctcgaggatgttgacaatggtgatgatgat
gatgtgctagcaacagatggcactgaagacgagtgtttcaaaagaaaacaagtggaggag
caggagataaaagagggcgagggaggtgaattaaaagatgagaggagagctagagaagct
gaggttgccatttcaggggaaaaagagatgagggagtgggactgtgaaaacacagaaaga
gagaagttccaacagaagggagattctgaggagaacgttttttatgaccgatctgttgat
gagctatcaggtcatgagtcgagcctcactgatgagggcatagtcacagaaccagaggct
ggactgggtgaccctgagaggttatttgtcaggtcaagtttaggatcatcgttggccaga
gatgtgctaggtcaacccctcaccatctggaagcagtctgctctgcatgaggatgagtgg
ccagggttacacgagggattgcgagagggatcagggttaaacgagggaatgcgagaggga
tcagggttaaacggaggagcgagagagaaacgagagaaccctgtctctgttcctgccctt
ggggttgagagtgagagcattgctgtagtaacagagatgagcggcgtcaataacaacaac
agtactagcgggagggccaatgtatcccagggtgcctcagtcccaggacttgaggcacct
cccactccgagcgcaatccgccgccgccgtaagttctcctcaaccgggaacgcgggctct
gactccagcaacggcagcactggggagtccaacgggaacggggatgtttaccgttcgcta
agcgaccccatgcctcaccggcgccgctctgtgtcagaagaagggaataacagcttctct
ttggatagtaacctgctggggtctctctctctctcctccaagggggcaggaggagtcgga
ggaggaagtgtcccagagtcgtcctctacagctgatctatcagagtgcacgggcagcgtg
gctagcgacctatcgctgtgcagtgatggtggtctccgtgacgactacagcaatgtgatc
cggaacattgttgcggagccaggagcgatggacagactgatgacggatgacaagaacaac
ggaaaagccacgaagaagaagtccttctctgaccccagtcgccgtggtgacggccccctg
cttgatgaaccagggttcaaaagtcactatcaccctaaagaaccagtcagtgagctggat
cagcctggtcagatcccgccctccagcagtgagccaatcctgagtgagcagagagatgag
ctgtgggagctcagagatgaatgtggacacccattacttagtcgtcatggcaacaatgaa
gtcgggaaattccgctcccaatcagaaagggaggtgcactcctgtctccatagtgatgac
acagacagagtgggaggaggggagatattgaactctgacctcaaattagcggagcttgtg
tctcccggaatgggccggcggaccaacaggaaacgccccaactgggtcacccaatcagca
tcagaggagccggaccactcggaaccaggtccagaggaccaggatcaagaccagactgat
ctcacccccccattgcctctggtcccccccaaacccaaaactaggtccaagcacgtccgc
cacgccagcgaacctgccaccttcatccccatcttcccacctccacagccccagcgagcc
caaggggatccgccttccctactacctgcctgtgaactctccatcctgggtaagcccacc
agtgaggaggccccctccctggaagatgtgaccaagcggtatattctggccctgaatgct
ccagggggcgagagcgagccgtctggttctgagtctgggtctagaggaacggtgcctgta
ccagacgggtccaactccagccctgctactcccagtggtgccagagaacccagactgcag
aggaagagcagtgaggagctgaccacaccagccccacagagtgccaaacccagagtggat
atgagaagacatgtcgtgatgaccctcctggacactgagcagtcttatgtggagtcactc
cggacactcatacagggctatatgcggcctctgaagcagccagacagtggctccctagtt
gatccctcattggtggatgagatgttctatcagattccagagatcctggagcaccatgag
cacttcctggaacaggtcaccggctgcattagccaatggcacgacagacagaccgtgggt
cagttgcttatccaatcgttctccaaagagattcttgctaatatttattcagcatacatc
gataactttctgaacgccaaagacgccgtgaggatcgcaaaggaggccaagccggcattc
ctcaagttcctggagaccagtatgcgtgagaacaaggagaagcaggccctgggtgatctg
atgatcaagcctgtccagaggatcccccgttatgagctgctggtcaaggatctgttgaag
cacactcctgaggaacatccagaccacccgttgctattggatgcccagagagacatcaag
cgattggctgagaagatcaataaggggcgtcgctctgcggaggaggtggagagagagaca
cgcgtcatgcaggagatagaagcccacatcgagggagtggaacatgtcagagatatcctt
aacccaatgaggaagttcctgagacaggagatggtgatggaggcgaagaccgtggggggt
aagaaggaccgctctctcttcctcttcagtgatctgctcatctgcaccaccctcaagagg
aagtctggatccctgagacgcagctccatgagcctgtactctgttgccagtgtgatcgac
acttccagtaaatataaattcctgtggaaacttcccctagaggacgtggagatggtgaaa
aacccctcccaggcaaccaacaaagagaccatccagaagatgattggtcgactggacgag
gacctgagtacactgggacagatcagcaaactatcagagactctcagcttccctcaccag
tctctggatgatgtgataaaggacctgatgtcgtcggtccacagggagcttgcagagaaa
cagtctctagccttcagtatgagcttcctgcccaccaagctggagctgaccacggcctcc
gcagaaacaagcttcgtcttcgagttcagctccccagacacacgcagcaacttccaacag
gccttcgaagatgccaagaagaaactggcaatgaataaggaccagtgggacccagagttc
ctgaaggcgatccccattatgaagactcgtagtgggatgcagttctcctgtgcctccccc
agccacagttgtccagagagcagcagtgaggtgtgggtgtgtaacagtgatggttatgtg
ggccaggtgtgtctgctcaacatcagagaccagcccactgtagaggcctgtatcgctgtc
tgctctgctaggatcatctgtatcgccgcggtccctggactcaaggggagggaacgtgga
gtggagcactcctcagcccctccccctgtagctgttgactccaccccattccggcagcag
cagctacacatctccatctctcattcgtcgctggagctgaccaagcccccttcaggggcg
gggccagagttagttccatttgatagtgatgacacggacgatgaagattctcctagcccc
tcctctacactgcagagccaagccagtcactctactgtgtcatccagctatggcaatgag
gaggggtctggttctaaggacatggctacagagaccaccagtagtgaggaggagcaggac
taccccgtggccagttcttatggagctccaggcaggccaggggggggtggaataggtcga
ccccacagcgagagccccatggacgggagagcgatgcgccgctcctcccggggatccttc
actagagccagtctggaggatctgctcagcattgacccggaggcttaccagagctctgtg
tggctgggcacagaggacggatgtatccatgtgtaccagtcatcagacaacattcggaac
cgtaagaacagcatgaagatgcagcattctgcccccatcctgtgtgttctctacctggac
aacaaggtgtttgcgtccctggccaacggagatgtgatcgtctaccagagggaggtgggg
agtttctgggacgcccagtcatctcagacgttgagtctgggcacgcccagtagtcctgtc
actaagatggtcccggtcggtgggaagctgtggtgtggttcacagaaccgcgttctcatc
atcaacacaaccacactggtgcaagagcactggttccaggtgggcacagacagcagtagg
tgtgttacctgcatggtgagctacggccagggagtgtggctggcgctccagggtagtgcc
cagatcagactttaccacgcccagacctgggacagcctgacggaggtggacgtggccccc
gccgtgcacaagatgcttgcaggttcagatgcgatcatccggcaacacaaggcagcgtgt
ctgaggatcacagctctcctggcctgtaaggacctgctgtggatcgggaccagtgcaggg
gtggtcctgaccctgtctatcccagccgtcagctctgggactgtgtcagggacgctgcgg
tcacctctgacccccatgggctccgctcatggacacactggccatgttaggttcctcacc
tccatagaactacctgaaggcttcgacgtcaacttccccctgcccgccgataccacaggc
aacccagcccagagtggtgttgaagggggtaatgggggtctgcagaggcgagattccgct
cgccgtcgagcctccgccctcctgcccgttaaaaccaatcagttggtgatctccggtggc
gatggctatgaggacttccggctgaccaatagcagtgagacagtggggcgggacgacagt
accaaccacttactgctctggagggtctga
DBGET
integrated database retrieval system
