Oncorhynchus tshawytscha (Chinook salmon): 112267677
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Entry
112267677 CDS
T05605
Name
(RefSeq) ELAV-like protein 1 isoform X1
KO
K13088
ELAV-like protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112267677
03041 Spliceosome [BR:
otw03041
]
112267677
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112267677
mRNA cycle factors
Stress granule specific factors
112267677
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
General mRNP proteins
112267677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RBD_DEAH11
RRM_3
Cyt-b5
Motif
Other DBs
NCBI-GeneID:
112267677
NCBI-ProteinID:
XP_042152816
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All DBs
Position
LG14:4547411..4554712
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AA seq
353 aa
AA seq
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MAVRRGHIRYLKEVYDMSNGYEDHMGGGDEVTDAKTNLIVNYLPQSMSQDELRSLFSSIG
EVESAKLIRDKVAGTEHLVPQCTTGHSLGYGFVNYLTPSDAERAINTLNGLRLQSKTIKV
SYARPSSDTIKDANLYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQASGLSRGVAFIR
FDKRAEAEDAIKDLNGQKPPGSAEPITVKFAASPNQAKNTQLISQLYHNQGRRFGGPVHH
QAQRFRFSPMSVDHMSGMSGVSVPGNATAGWCIFIYNLGQDADEGILWQMFGPFGAVTNV
KVIRDFNTNKCKGFGFVTMTNYEEAAMAIGSLNGYRLGDKILQVSFKTSKGHK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcgaagaggccacatcaggtaccttaaagaggtgtatgacatgtccaacggc
tacgaggatcacatgggaggaggagatgaggtgacggatgccaagaccaacctgatagtc
aactaccttccccagagcatgagccaggacgagctacgcagcctcttcagcagcattggc
gaggtggagtccgccaagctcatacgggacaaagtggcaggtacggaacaccttgtccca
caatgcactacaggccacagtttagggtacggatttgttaactatcttacccctagcgat
gcagaaagagctatcaatactctgaatggactaaggctacagtctaaaactatcaaggtt
tcatatgcgcggccgagctctgacaccattaaagacgccaacctgtacatcagtggcctg
cccaagaccatgacccagaaagacgtggaggacatgttcgctcgctacggacgcatcatc
aactcccgggtgctggtcgaccaggcctcgggcctgtctcggggggtggcgttcatccgg
tttgacaagcgagcggaggccgaggacgccatcaaagaccttaacggacagaaacccccc
ggatctgctgagccaatcacagtgaagtttgctgccagtcccaaccaggccaagaacact
caactcatatcgcagctctaccacaaccagggacgccgctttggagggccagttcaccac
caggctcagagattcaggttttctccgatgtctgtggaccatatgagcggtatgtctggg
gtgagtgtgccggggaacgccaccgctggctggtgcatcttcatctacaacctgggccag
gacgccgacgagggcatcctgtggcagatgttcgggcccttcggagccgtcaccaacgtc
aaggtcatccgcgacttcaacaccaacaagtgtaaaggcttcggctttgttaccatgacg
aactacgaggaggccgccatggcgatcggcagcctcaatggttaccgcctcggggacaag
atcctacaggtgtcgttcaagaccagcaaaggccacaagtag
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