Oncorhynchus tshawytscha (Chinook salmon): 112267697
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Entry
112267697 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112267697
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
112267697
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
112267697
NCBI-ProteinID:
XP_024301645
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Position
LG14:5716210..5720580
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AA seq
278 aa
AA seq
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SWATQRGWCWPSWDRTHSSKTYWESWSNWAVKAETNQQLTGSTASQPAPSSSCSSSSSTC
GYVEAQQGRSDSPYQTDLLLGDKDNLRPVVLDGSNVAMSHGNKEVFSCYGIQLAVDWFLE
RGHRDITVFVPSWKKEQSRPDALITDQDILRRLEKDKILVFTPSCLVHRFIVKLAYKSDG
IIVSNDNYRDLACEKPEWKKLIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRRRPIM
PEHKKQPCPYGKRCTYGHKCKYYHPERSAQCQDLCHLH
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
agctgggctacgcagaggggctggtgctggccaagctgggaccgtacacactcatcaaaa
acatactgggagagctggtcaaactgggctgtaaaggcagagacaaaccaacagctgact
gggtccacagcttcacagcccgccccctcatcctcctgctcttcctcctcttctacctgt
gggtatgtggaggcgcagcaggggaggtcagactccccctatcagacagacctcctcctt
ggggacaaggacaacctgcggcccgtcgtcctggacggtagcaacgtggcaatgagccac
ggcaataaggaggtgttctcttgctacggcatccagctggctgttgattggttcctggag
cgaggtcaccgtgacatcactgtgtttgtgccgtcctggaagaaagagcagtcccgccct
gatgccctcatcacagaccaggatatcttgcgtcgtctggagaaggacaagatcttggtg
ttcactccgtcttgtctggtccaccgtttcatcgtcaagctggcctacaagtccgacggc
atcatcgtctccaacgacaactaccgtgacctggcctgtgagaagccagagtggaagaag
ttaattgacgagcggctgctcatgtactcatttgtcaacgacaagttcatgcctcctgat
gaccctctaggtcgtcatggtcccagtctggagaacttcctgaggagacgtcccatcatg
ccagagcacaagaagcagccctgtccttacggcaagaggtgcacttacggccacaagtgt
aagtactaccacccggagaggagtgcccagtgccaagacctctgccacctccactag
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