Oncorhynchus tshawytscha (Chinook salmon): 112267720
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Entry
112267720 CDS
T05605
Name
(RefSeq) secretory phospholipase A2 receptor
KO
K06560
mannose receptor, C type
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112267720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267720
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112267720
04090 CD molecules [BR:
otw04090
]
112267720
04091 Lectins [BR:
otw04091
]
112267720
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
C-lectin receptors
112267720
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
112267720
CD molecules [BR:
otw04090
]
Proteins
112267720
Lectins [BR:
otw04091
]
C-Type lectins
Group 6: Mannose receptor family
112267720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
UL45
Motif
Other DBs
NCBI-GeneID:
112267720
NCBI-ProteinID:
XP_042152941
LinkDB
All DBs
Position
LG14:complement(9872988..9897824)
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AA seq
1486 aa
AA seq
DB search
MRVYLSRCTESSGVLLLIFAIVFINSCDCVIEDDVVLEKKYLSELYNKGLFIMENTQLKR
CISSSSSNLVLESCERPTRRMLWKWVSRHRLFNLGSSLCLGLNISDSTQPLGTFECDSPL
RTLWWRCNGNTLYGASQLKLSVAGRLVVVKRASYHQWRRYSTPGEGPCAYPYEEIHTLLG
NAHGMPCALPFKYNNKWYSECTAEGREDHHRWCATTSRYDQDEKWGFCPSQELSCDTFWD
SNQESRACYQFNLYTILTWSQAHSSCLAQGGSLLSITDLTEQMYIRERLADVGVMVWIGL
NHLSERTGWQWSDGAPLALVNFTSGLSSSPLQDNRQCGVYNSASGGHQWQSLSCESALPY
ICKKTPNDTRRAEPLDNWQYYRTVCSEGWLAHNRYCYKALAEAEAGSWEDSSTACNSIGA
NLTSLHSLSDVELLLGLLANVSGSGSEVWIGLIKKLSSSAVEWSDGSPVDLTLWHVHHPA
HSNSQLCAKTDLTEGNWLLAPCDEKLPAVCRRAGLLSLLPTEAWDEGCPEDWKRKGRSCY
MVTSHEQSYEDAVKGYYCKAPLVTVENRFEQAFLNSLVSEMGANGSVFYWTALQDQGNQG
EYSWLGGHNGSTLPLLYTNWNRHQPVSAGGCVAMTGGQALGHWEVKDCKSQKALSVCKQS
ISGYQEVLFPTVHIDAYAPCPPGWESHSGLLHCYKAFHSEKVLMKRSWEDADFFCQALGA
QLASFHHYKEQVFVKGLLHSMFDGTEGRWFWVGLNKRDPQSAGAWEWSDGTPVVSSFVED
KNEEDDRHSCAVYSDLTNALLPQPCDTKHEWICKAPRGMELNKPYWYSDQNEPWVFYRGA
EYLLAKQPFPWEGVNLACMMMGAHLLSVHSKEELRFIRERMGKLSLGSTDWWIGLSTDLV
REEFSWSDKSAVDYQNWAEGSSHDAPVKQKQCVTMSSISGQWSAGECGGLHAHVCKRRTV
SVVEIPREPHYIGGCPERWLYFGHKCLLLHLPNSSEEGKSWRDAQSICSSFQGTLVAIQD
EIEQAYITMLLQGSTVGVWIGLRDEDTMKWTNGKPVSYTNWSPVEPKNPLTDEWLSGPLG
GDDPLCTVLSNNHNFHLTGKWFDEKCTESGYGFVCQRPQDTTKPPSHSYLHPLPDNIEYK
NHRYRVARGNMSWYEALNMCLESESELVSVTDPFHQAFLTVLVNRLAFPHWIGLYSQDDG
INYQWSDGSDTVFTHWVAADDDDFILGDCVYMDVTGGWRRADCEMPLQGALCHVPPPKSN
AFTTYEVVCPSTWVRFGASCYSFEPVVQRLTLEEAREHCKHKANTSEVLTIQTETENRFV
LEQLWSYGFPHQAVWLGMFFNTDTGSMAWLDGPPVDYSNWNFRAPDPSLLTADTCVSSRV
SDGMWLLSQCTDRLGFVCKTNPDMIPEVEVAPLNGLHHGIVPAAVLVAMLIFAVLVAALW
FVYKRNVTRFRRLPSLGNAYYRHTSSQATDSDGNVLIADLEAHSGE
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgagagtatatttatcacgctgtacagaatcttcaggagtgctcttgttaatctttgca
atagtctttataaatagctgcgactgtgtgattgaagacgatgtggtgttggagaaaaaa
tatctttccgaactctacaacaagggtctgttcatcatggagaatacccagctgaagcgc
tgcatctcctcctcctcctctaacctggtcctggagagctgtgagaggcccacccgccgt
atgctgtggaagtgggtgtctcgccaccgcctcttcaatctgggtagcagcctctgtctg
ggcctgaacatcagcgactccacccagcccctgggcaccttcgagtgtgactcacccctc
cggaccctgtggtggaggtgcaatgggaatacgttgtacggggcgtcccagctgaagctg
tccgtggctggacgcctggtggtggtcaagagggccagttatcatcagtggcggaggtac
tctacaccgggggaggggccatgtgcctatccttatgaggagatccacacactgttgggt
aatgcccacggcatgccttgtgccctgccgttcaaatacaacaacaagtggtactcggag
tgcacggcagaggggcgcgaggaccaccatcgctggtgtgccaccaccagtcgatacgac
caggatgagaaatggggcttctgtcccagtcaagagttgagctgtgatacgttctgggac
tcaaaccaggagagccgtgcgtgttaccagttcaacctgtacaccatcctgacgtggagc
caggcccactcctcctgcctggcccagggaggaagtctactcagcatcactgacctcact
gaacagatgtacatcagagagcggttggctgacgtgggggtgatggtgtggatcggactg
aaccacctgagtgagagaacagggtggcagtggtctgatggagctcctctggccttggtt
aacttcacctcaggcctatcatccagccctctgcaggacaacaggcagtgtggagtgtat
aactcagcgtcgggggggcaccagtggcagagtctgtcctgtgagtctgctctaccctac
atctgtaagaagacccccaatgacaccaggagagctgagcctctagataactggcagtac
taccgcacggtgtgttccgagggctggctggcccacaaccgttactgctacaaagccctg
gcagaggctgaggcagggagctgggaggactcctccactgcctgtaactccataggagcc
aacctcaccagcctacactcgctatctgatgtagaactgttgctgggcctgctggctaac
gtctcagggtctggctcagaagtgtggatcggcctgataaagaagctatcgtcctcagct
gtggagtggtcagacggctccccagtcgacctcactctctggcacgtgcaccatcctgcc
catagcaacagtcagctctgtgccaagactgacctaacggaggggaactggctgttggca
ccatgcgatgagaagctccctgcagtgtgtaggagagcaggacttctgtccctactcccc
actgaagcatgggacgagggctgtcctgaggactggaagcggaagggccgctcttgctac
atggtgacgagccacgagcagagctatgaagacgctgtcaagggttactactgcaaggct
cccctggtcacagtggaaaacaggtttgagcaggcctttctgaacagcctggtgagtgag
atgggggccaacggtagcgtcttttactggacggccctacaggaccagggtaaccaagga
gagtacagctggctggggggacacaacggatccaccctacccctgctctatacaaactgg
aacaggcatcagccagtcagtgcaggtggctgtgtggctatgacaggcggccaggccttg
ggtcactgggaagtgaaggactgcaaatcccagaaggccttgtcagtgtgtaaacagagc
atcagtggttaccaggaggtcctgttccctacagtccatattgacgcttacgccccctgt
cctccaggctgggaatcacactccggcctgctccactgttacaaggcgttccacagcgag
aaggtgctgatgaagcggtcgtgggaagacgctgacttcttctgccaggctctaggagct
cagctggccagcttccaccactacaaggagcaggtcttcgtcaaaggactcctccactcc
atgtttgatggaacagagggtcgttggttctgggtgggcctgaataagagagacccccag
tcagcaggagcttgggagtggtctgacggcacccccgtggtgtcctccttcgtagaggat
aagaacgaggaggatgaccgacatagctgtgccgtgtacagcgacctgaccaacgccctc
ctgccacagccctgcgacaccaagcacgagtggatctgcaaggctcccagaggtatggag
ctgaacaaaccctactggtatagcgaccagaacgagccctgggtgttctacagaggagca
gagtatctgctggccaagcagccttttccctgggagggagttaacctggcctgtatgatg
atgggcgctcacttgctgtctgtccactctaaagaggagctccgattcatcagagagcgc
atggggaagctctctctggggtcgactgactggtggatagggctgtccacagacctcgtg
agggaagagttcagttggagtgataagtccgctgtggattatcagaattgggcagaagga
agctcccatgatgccccagtgaaacagaaacagtgtgtgactatgtcctctatctcaggt
cagtggtcggcgggtgagtgtggcggtctccatgctcacgtatgtaagcgccggaccgtg
tccgtggtggagattcccagagagcctcactacatcggaggctgtccagagagatggctc
tacttcggacacaagtgtctcctgctgcacctccccaacagttctgaggaggggaagagc
tggagagacgcccagtctatctgctcctctttccaaggcacgctggtcgccatccaagac
gagatcgagcaagcgtacatcaccatgctgctccagggcagtacagtgggcgtttggatt
ggtctacgggatgaggacaccatgaaatggaccaatgggaaacctgtcagctacaccaac
tggtcccctgtagaacccaagaaccctctgacggatgagtggctgagcgggcccctgggc
ggggacgatcctctgtgcacggtgctctccaacaaccacaacttccacctgacagggaag
tggttcgacgagaagtgcacagaaagtggatacggctttgtctgtcagagaccccaagac
acaactaaacccccatcccactcctacctccaccctctccctgacaatattgagtacaag
aaccacagatacagggttgcccgtggcaacatgagctggtacgaggcgctgaatatgtgc
ttagagtctgagtctgagctggtgagcgttaccgaccccttccaccaggctttccttact
gtccttgtcaatagattggcattcccccactggattggactgtatagtcaagacgatggg
atcaactaccagtggtctgacggcagtgacacggtcttcacccactgggttgcggccgat
gatgatgatttcatcctgggggactgtgtgtacatggacgtcaccgggggctggaggagg
gccgactgtgagatgccgctccagggagccctgtgccatgtcccaccacctaagagtaat
gcgttcaccacctacgaggttgtgtgtccatcgacgtgggtgaggtttggcgccagctgc
tacagctttgagcccgtggtccagagactgaccctggaggaggccagagagcactgcaaa
cacaaagcgaacacgtcagaggtcctgaccatacagacagagacggaaaacaggtttgtc
ctggaacagctgtggtcgtatggcttcccacatcaagccgtctggctggggatgttcttc
aacactgacacgggctccatggcatggctcgatggtcctcctgtggactactccaactgg
aacttcagggccccagaccccagcctgctgacagcagacacctgtgtgtccagcagggtg
tctgatgggatgtggctcctctctcagtgcactgacagactgggctttgtctgcaaaact
aacccagatatgatcccggaggtagaagtggcgccactaaatgggttgcaccatggtatc
gtcccagccgcagtcctggtggccatgctgatcttcgccgtgctggtggcggcgctctgg
ttcgtctacaagaggaacgtgacgcgcttccgcagactgccgtccctgggaaacgcgtac
tacagacatactagttcccaggccacagactccgatggaaacgttctcatcgcagatctg
gaagctcactccggagaatag
DBGET
integrated database retrieval system
