Oncorhynchus tshawytscha (Chinook salmon): 112267722
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Entry
112267722 CDS
T05605
Name
(RefSeq) CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112267722
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112267722
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112267722
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
112267722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
Sec7-like_HUS
TOR1L1_N
Cnd1
Adaptin_N
HEAT_DAAF5
ParcG
MMS19_C
Paxt-1_C
MMS19_N
KH_DEAH11_1st
ZapG-like
Motif
Other DBs
NCBI-GeneID:
112267722
NCBI-ProteinID:
XP_042152971
LinkDB
All DBs
Position
LG14:10254783..10294499
Genome browser
AA seq
1544 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQVLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILSALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICHLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNIIFSKFDEVQRSGNMILSPVSDK
NFEDDDSVDGGRSSSSKGPSSGKKTVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVPAMQLFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNRFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTGSCQSKSVAVRRRSFEFLDLLLQEWQTSSLE
RNVAVLTETIKKGVHDADSEARSVARKCYWTFHGHFSREAEQLFQALESSYQKALQSHMK
SSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTVTRTKAASSRGPSTPGSLQRSRSDV
DVNAAATACAKTRMTPVPSSPAPFSAASALPPGSYASLGRVRTRKSISVSRVPLSQTVGR
SRAKMVSVSQAGSRSGSPGRLLSHTYGRIPRATGATTPSDRRPKVPRSHGCSRDTSPDRS
GLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLERLGLAHQARISASVNAMRILNT
GTEVEAAVADALLLGDARNNKRRPVRRRYESPGIYSDDDANSDASSACSERSYGSRNGGP
SHYMRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLVSQRILSRVELKRLCEIFTRMFAD
PHSKRVFSMFLETLVDFITLHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTR
DSFPFDQQFNILMRFIVDQTQTPNLKVKVAILRYIECLARQMDPADFVNSSETRLAVSRI
ITWTTEPKSSDVRKAAQVVLIALFELNTPEFTMLLGALPKTFQDGATKLLHSHLRNSSNT
GVASPSSTMGRTPPPPRHPSSRSSPLTSPTNCSRGGALSPSRLWGWSADGLSKYPPPFPS
PLSSTPAVPSLKTLRSAYSPSMLEYDTENLNTDQIYSSLRGVTEAIQNFSFRSQEDLMEP
GRGKREDTPGVGTASHSGADVVEGPGGRTALDNKTSLLNTPSPRSFSGPRGRDYNPYNYT
DTISAYDKAALKETVYEDDVEQLRDGRQECGGENKMLHTKNSSPSEQLELAGELLKELSN
PSERPEERRGALVELLKIAREDSLAVWEEHFKTMLLLLLETLSDQDHTIRALALRVLKEI
LRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEESASTLAGSIHPEQCIKVLCPIVQT
ADYPINLASIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAVYS
VIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggaacaggttatgcagaaggacctgggtaggaga
ctacaggtgggccaggacatcatagactccatcctagacaaggacaagtcccaggtcctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggacatactctcagctttagtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaagaccaagtcagagaccaggaccaagctcttctactaaagatcatggac
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggacccgggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtcatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctaccgacacgtcggggag
cgggtgcggatggacctggggaaaaagggactgccacaatcacggttgaatatcattttc
agtaaatttgatgaagttcaaagatcggggaacatgatcctgtcccctgtctcagataag
aactttgaagatgatgattcggtggacggggggcggtcctcctcttctaagggcccgtcg
tcagggaagaagacagtgagcatggggtcgttccgtaggcccagctctgcttccagcacc
aaatcaacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgtgccttcgaggaagtgcccgctatgcaacttttctctaacagggaaatggag
gacgccatgaccaagatcagggaggtgctggctgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctgctcctggcgggggcggtggagtttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcctgtatcactctgggccacctgtcctacatcctggggaac
aggtttgatcattgtgctgagtccatcatgcccactctcctaaccctggtctctaactcg
gccaaggtcatggccacatccggaatcgctgtcatacgactcatcatcagacatacacac
taccctcgtctcattcctatcgtgaccggcagctgccagtccaaatctgtggccgtgaga
aggcgcagttttgagttcttggacctcctgctgcaggagtggcagaccagctctctagag
agaaatgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactccgag
gccagatcagtggccaggaagtgctactggacgttccacggccacttcagccgggaggcg
gaacagctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatgaag
agttctgacagcatcctgtccctccctgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtctgccaagagctccatgggaaacaccgtgaccaggacgaaa
gcggcttcctccagaggtccctccaccccaggctctctacagcgttcccgtagcgacgtg
gacgtgaacgctgccgccaccgcttgtgccaagaccaggatgactcccgtgccctcctcg
ccggcccccttcagcgctgcctccgctctgccacccggctcctacgcctctcttggccgt
gtgcgtaccaggaaatcaatcagtgtttctcgagtccctctgtcacagacagtggggaga
agtcgagccaaaatggtgtcagtgtctcaagctggcagtcggtctggctcccctggtcgt
ctcctgagccacacatacggcaggatccccagggcaactggagcgacaacgccatcagac
aggaggcctaaagtcccccgtagccatggctgcagccgagacaccagtccagacagatca
ggcctggcgaggagtcgtatcccccggcccagcatgagtcagggctgcagcagggacacc
tctagggagagcagccgggacaccagccccgctcggggattctctcctctggagcgtcta
ggtctggcccaccaggcccgtatctcagcctctgtcaacgccatgaggatcctcaacacc
gggaccgaggtggaggcagctgtagccgacgccctgttactaggagacgccaggaacaac
aagcggcggccagtcaggcggcggtacgagtccccgggcatctactcagacgacgacgct
aacagtgacgccagcagcgcctgctctgagcgctcgtatggctcgcggaacggcggcccg
tcccactacatgagacagacggaggacgtggccgaggtgctgaaccactgtgccagttcc
aactggtctgagaggaaggaggggctgctgggactacagaacctgctcgttagccagaga
attctcagccgtgtggagctgaagcggttgtgtgagatcttcactaggatgtttgctgac
ccacacagcaagcgagtgttcagcatgtttctggagaccctggtagacttcatcaccctg
cacagagaggacctgcaggactggctgtttgtcctgctcacccagctgctgaagaagatg
ggagctgacctcctgggttccgtacaggccaaggtccagaaggctctggacgtcaccagg
gactcgttcccgttcgaccagcagttcaacatcctgatgcgtttcatcgtggaccagacc
cagacccccaacctgaaggtcaaggtggccatcctgaggtacattgagtgcctggcccgt
caaatggaccccgcagactttgtcaactccagcgagacacgcctggccgtctcccgcatc
atcacctggaccacggaaccaaagagctccgacgtccggaaggcggcccaggtggttctg
atcgccttgtttgagctgaacaccccagagttcaccatgctgctgggggccctgcccaag
accttccaggacggagccactaaactgctgcatagccacctgcggaactccagcaacacc
ggagtggcttctcccagtagcaccatgggacggactcctcccccgcctcgccaccccagc
agtcgcagcagccccctcacctctcccaccaactgctcccgtgggggcgcgctctctccc
agtcggctatggggttggagtgccgatggcctgtcaaagtacccccctcccttcccttct
cctctctcctccacccctgctgtcccctccctgaagaccctacgaagtgcttactctccc
agcatgttggagtacgacacagagaacctgaacaccgatcagatttatagctccctgcga
ggcgtcactgaggccatccagaacttcagcttccgcagtcaggaggatctcatggagccg
ggcagaggcaagagagaggacacgccgggtgttggaacagcatcacactctggtgccgac
gtagtggaggggcccgggggtcgcacggccctggacaacaagacctccctactcaacacc
ccctccccgcgttccttctccgggccccggggccgcgactacaacccctacaactacaca
gacaccatcagcgcctacgacaaggctgccctgaaagagacggtgtacgaggacgacgtg
gagcagcttcgagatggccgccaagagtgtggtggagaaaacaagatgctgcacaccaag
aacagttccccttcggagcagctggaactggcgggtgagctgctgaaggagctgtctaac
cccagtgagaggccagaggagaggaggggagccctggtggagctgctgaagatagcccgg
gaggacagcctggcagtgtgggaggaacacttcaaaaccatgctgctcctgctgctggag
accctgtcagaccaagatcacaccatccgggccctggcactacgagtgctgaaggaaatc
ttacgtaaccagccggcccgcttcaagaactatgcagagctcaccatcatgaagactctg
gaggcacacaaagactcccacaaagaggttgtgcgggcagcagaggagtcagcctccacc
ctggctggctccatccacccagagcagtgtatcaaggtgctgtgtcccatcgttcagacg
gctgactaccccatcaacctggcttccatcaagatgcagaccaaggtgatcgaacgcatt
accaaggagtccctccaccagctgctgcctgacatcataccaggactactgcaggggtat
gacaacacagagagcagtgtgaggaaggccagtgtgttctgtctggtggctgtctactct
gtcatcggtgaagagctgaagccctacctggcccagctcacaggaagcaagatgaagctg
ctgaacttgtacataaagagagcccagacgtccaccagcaacagcagcagctcttcagac
atctcctcatactaa
DBGET
integrated database retrieval system
