Oncorhynchus tshawytscha (Chinook salmon): 112267736
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Entry
112267736 CDS
T05605
Name
(RefSeq) intersectin-1-like
KO
K20045
intersectin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267736
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112267736
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
112267736
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112267736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_13
SH3_9
SH3_1
SH3_2
RhoGEF
INTAP
EF-hand_4
C2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
PH
PH_16
Motif
Other DBs
NCBI-GeneID:
112267736
NCBI-ProteinID:
XP_042152993
LinkDB
All DBs
Position
LG14:13382322..13442159
Genome browser
AA seq
1762 aa
AA seq
DB search
MAQFPTPFGGGLDAWVISLDERAKHDQQFVSLAPSPAGYITGDQARNFFLQSGLPPPILA
QIWAQADMNNDGKMDMHEFSIAMKLIKLKLQGHSLPPSLPPSMKQPPLTLPPPPTAPFGM
HGLGVMPGLPAVPPLPMPPMPGVGMSPPLVSSVPPSVPPMANGAPMTGFSHQATTLNKSS
SFNRPGAKLQGQSFETSSSPVPPQPPIDWAVPSSSRLKYRQLFNSHDKMMSGHLTGPQAR
TILMQSSLPQTSLASIWNLSDIDQDGKLTAEEFILAMHLIDMAMSGLPLPPILPPDFIPP
PFRRVRSGSGVSVTSLHSTDQRVQEEAEEEQESEKQKLEKLTFEDRKRENFERGNLELEK
RRQALLELQRKEQERLAALEREEQERKERERLEQERRRQQELEKQLEKQREVERQREEER
RKEIERREAAKRELERQRQLEWERNRRQELLTQRNREQENIVLLKARKKTLEFELEALND
KKSQLEGKLQDIRFRLSAQRHEIESTNKTREIRIAEITHLQQQLQDSQQWLGRLIPDKQC
LNEQLKQVQQNSLHRDSLSSLQKAVEIKESSRQQLREQLDTVERETRSKLLEIDAFNTQL
TELREIHSKQQRQKQKDHLEGEINIHAIAQERAKSAELTDGRLSATDEGLAWQDEGTVEA
PTPPPQPWMKRVSEEGHTKKDMQDKLNQLFMQQPEPGKLMNQSQWPTGDKIPVTGFNQDK
VKVVFYRALYPFDARSHDEITITPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPAN
YAEKIPESEVPMSLRASAATTGAAPKLASRLTPTAASNTPTPPSQPMATPPPVTAPPAPG
PCPGPGPASSSSSVSSNWADFSTTWPSTSSVEKTETGEGWDAWPTQPSLSVPSAGPGGQL
RQRSAFTPATLTGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKSDVITVLEQQD
MWWFGEVQGQRGWFPKSYVKLISGPVRKSMSIESGSSDSPPTMKRPTPSPTKTMDPGEEY
IAMYTYESNEQGDLTFQQGDVIVVTKKEGDWWTGLVSGKTGVFPSNYVKPKDSEGLGPAG
KTGSLGKKPEIAQVIAPYTATGAEQLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGW
FPANYVKLLSPSTSKTTPTEPTPPKLPMPSAGRGQEQGPDGGPPGPWGPSLTQHMTAVCQ
VIGMYDYMAQNDDELPFGKGQIINVLSREDPDWWKGELNGSVGLFPSNYVKLTTDTDPSQ
QWCADLHLLDMLTPVERKRQGYTHELIVTEENYVNDLQLVTEVFQKPLLESELLTEKEVA
MIFVNWKELIMCNIKLLKALRVRKKMSGERMPVKMIGDILTAQLPHMQPYIRFCSCQLNG
ATLIQQKTDEVPEFKDFVKRLAMDPGCKGMPLSSFLLKPMQRVTRYPLIIKNILENTPEA
HPDHSHLKQALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLG
PRKFLHSGKLYKAKSNKELYGFLFNDFLLLTQIIKPLGFSGCDKVFSAKSHLQYRMYKTP
IFLNEVLVKLPTDPSGDEPIFHISHIDRVYTIRAESINERTAWVQKIKAASELFIETEKK
KREKAYLVRSQRATGIGRLMVNIVEGIELKPCRSHGKSNPYCEVTMGSQCHITKTLQDTL
NPKWNSNCQFFIKDLEQDVLCVTVFERDQFSPDDFLGRTEIRLADIKKDQGSKGPITKRL
LLHEVPTGEIVVRLDLQLFEEP
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtttcccacccccttcggagggggcctggacgcctgggtgatctctctggac
gagcgagccaaacatgaccagcagtttgtcagcctggccccctcaccagctggctacatc
acaggtgaccaggccaggaatttcttcctgcagtcaggcctgccccctcccatcctggca
cagatatgggcccaggccgatatgaacaatgatgggaagatggatatgcacgagttctcc
atcgccatgaagctgatcaagctcaagctgcagggtcactccctgcccccctctctgccc
ccctccatgaagcagccgcccctcaccctgcccccgccacccaccgcacccttcggaatg
catggtttaggggtaatgccaggcctcccagcagtccctccattgcccatgccccctatg
ccaggggtgggcatgtccccccctctggtgtcatcggtgcccccgtctgtaccccccatg
gccaacggcgcgccaatgacgggcttctcccaccaagccacgacactcaacaaaagctct
tctttcaaccgcccgggtgccaagctgcagggccagtcttttgagacttctagctcccct
gtgcccccccagccccccattgactgggctgttcccagctcgtcccggctaaagtaccgg
cagctcttcaacagccacgacaagatgatgagcggccacctcaccggaccccaagcaaga
accatcctgatgcagtccagcttgccccagacctcgctggcgtccatatggaacctgtcg
gacatcgaccaggacggcaagctgacagccgaggagttcatcctggccatgcacctgatt
gacatggccatgtccggcctgcccctgccccctatcctgcccccagacttcatcccccca
cctttcaggagggtgcgtagtggtagtggggtgtctgtcaccagcctgcactccactgac
cagcgggttcaagaggaggccgaagaggagcaggagagcgagaaacagaagctggagaaa
ctgacttttgaggacaggaagcgggagaactttgagcggggcaacctggagctggagaag
cgtcgacaggccctgcttgagctgcagcgcaaggagcaagagcgtctggcagcgctggag
cgcgaggagcaggagaggaaggagcgcgagcggctcgagcaggagaggcggcggcagcag
gagctagagaagcagctggagaagcagagggaggtggagaggcagcgcgaggaggagaga
cgcaaggagatcgagaggagagaggcggcgaagcgggagctggagcgccagcgccagttg
gagtgggagaggaaccgccggcaggaactgctgacccagaggaaccgagagcaggagaac
attgtcctgctcaaagcccgcaagaagaccctggagtttgagctggaggcactgaacgac
aagaagagccagctggagggcaagctgcaggacatccgcttccgcctgtctgcccagcgg
catgagatcgagagcaccaacaagacccgcgagatccgcatcgctgagatcacccaccta
caacagcagctgcaggactctcagcagtggctcggcaggctgatccctgacaaacagtgt
ctaaacgaacaactcaaacaggttcaacagaacagcctgcacagagactccctgtcgtcg
ctgcagaaggcggtggagatcaaggagtctagtcggcagcagctgagagaacagctagac
accgtggagagagagacccgctccaagctgctggagatagacgccttcaacacccagctc
acggagctccgagagatccacagcaagcagcagaggcagaagcagaaggatcacctggag
ggagaaatcaacatccacgccatcgcccaggagagggccaagtccgccgagctcacagac
ggaaggttgtctgccactgacgagggcctggcgtggcaagatgagggcacggtggaggcc
cccaccccgcccccccagccctggatgaagcgcgtgagtgaggaggggcacactaagaag
gacatgcaggacaaactcaaccagctcttcatgcagcagcctgaaccagggaaactcatg
aatcagagccaatggcccacgggcgacaagatcccggtgactgggttcaaccaggacaag
gtcaaggtggtcttctaccgggcgctgtacccctttgatgcccgcagtcacgatgagatc
accatcacccctggagacattgtcatggtgaaaggggagtgggtggacgagtcccagaca
ggtgagccaggctggctgggcggcgagctgaaggggaagacaggctggttccctgccaac
tacgctgagaagatcccagaatccgaggttcccatgagcctgcgggccagtgccgccacc
acgggcgccgcgcccaaactggcctcacggctcacacccaccgccgcctcaaacacaccc
acgccacccagccagccaatggcaacccctcccccggtgaccgctccccctgcccccggt
ccctgccctggccctggtcctgcctcttcctcctcctcggtatcaagtaactgggcagat
ttcagcaccacatggccgtccaccagctctgtggagaagactgagactggggagggctgg
gacgcttggcccacccagccgtctctctctgtgcccagtgccgggcccgggggccagctg
cgccagcgctctgccttcacccccgccactctcactggctcctctccatctcccgtcctg
ggacagggggagaaggtggagggtttgcaggctcaggctctgtacccgtggcgggccaag
aaggacaaccacctcaacttcaacaagagcgacgtgatcacagtgctggagcagcaggac
atgtggtggttcggcgaggtgcagggccagcggggctggttccccaagtcctacgtcaag
ctcatctcgggccccgtacgcaagtccatgagcattgagtctggctcgtccgacagcccg
cccaccatgaagagacccaccccgtctcctaccaagaccatggacccaggagaagaatac
atagccatgtacacctacgagagcaacgagcagggcgacctgaccttccagcagggcgac
gtcatcgtggtcaccaagaaggagggcgactggtggacgggcctggtctcgggcaagacg
ggggtattcccttccaactacgtcaaacccaaggactctgagggactgggacccgcaggg
aagacgggaagcctggggaagaagcccgagatagcccaggtcatcgccccatacacggcc
acgggggccgagcagctcaccctggcgcccggccagctcatcctcatcaggaagaagaac
ccggggggctggtgggaaggggagctgcaggcccggggaaagaagcggcagattggctgg
ttcccggccaactacgtgaagctcctgagccccagcaccagtaagaccacgcccacagaa
cccacaccccccaagctgccaatgcccagtgcaggtaggggccaggagcagggacctgac
gggggcccgccggggccttggggcccctccttgactcaacatatgactgcagtgtgtcag
gtgattggcatgtacgactacatggcgcagaatgatgacgagctgccctttgggaagggc
cagatcatcaacgtgctgagcagggaggaccctgattggtggaaaggcgagctaaacggt
tccgtgggcctcttcccctccaactacgtcaaactgaccaccgacacagaccccagccaa
caatggtgcgctgacctgcacctgctggacatgctgacacccgttgagaggaagagacag
ggctacacgcacgagctcatcgtcaccgaggagaactatgtcaatgacctgcagctcgtc
accgaggtctttcagaagcctctgctggagtcggagctgctgacagagaaagaggtggcc
atgatctttgtcaactggaaggagctcatcatgtgtaacatcaagctgctcaaagctctg
agggttaggaagaagatgtcgggcgagcggatgccggtgaagatgattggagacattctg
acagcccagctgccccacatgcagccctacatccgcttctgcagctgccagctcaacggg
gccacgctcatccagcagaagaccgacgaggtgcccgagttcaaggactttgtcaagaga
ctggccatggatccaggttgtaagggaatgcccctctccagcttcctcctcaaacccatg
caaagggtgacacgctaccccctcatcatcaaaaatatcctagagaatactccggaggct
cacccggaccatagccatctgaagcaggctctggagaaggctgaggagctgtgttcccag
gtcaacgagggcgtcagggagaaggagaactctgaccggctagagtggatccaggcccac
gtccagtgtgaggggctgtctgagcaactcgtgttcaactcggtgaccaactgcctgggc
ccgcgcaagttcctgcacagcggcaaactctacaaggccaagagcaacaaggagctgtat
ggctttctattcaacgacttcctcctgctgactcagatcatcaagcccctgggcttctcg
ggctgcgacaaggtgttcagtgccaagtcccacctgcagtaccgcatgtacaagacgccc
atcttcctgaatgaggtgttggtgaagctgccaacagatccctcgggagacgagcccatc
ttccacatctcccacatcgacagagtctacaccatacgggcagagagcatcaacgagagg
actgcttgggtgcagaagatcaaggcagcttcggagctcttcatcgagacagagaagaag
aagagggagaaggcctacctggttcgctcacagagggccacgggcatcggccggctgatg
gtaaacattgtggagggcatcgagctgaaaccctgccgctcccacggtaagagcaacccg
tactgcgaggtgacgatgggttcccagtgccacatcaccaagaccctgcaggacactctc
aaccccaagtggaactccaactgtcagttcttcatcaaggacctggagcaggacgtgctg
tgtgtcaccgtgtttgagagggaccaattctctcctgacgatttcctaggcaggacagag
atccgtctggcagacattaagaaggaccagggctccaaagggcctatcaccaagaggctg
ctgctccacgaggtgcccacaggagagattgtcgtacgactggacctgcagctcttcgag
gagccctag
DBGET
integrated database retrieval system
