Oncorhynchus tshawytscha (Chinook salmon): 112267818
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Entry
112267818 CDS
T05605
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112267818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112267818
03012 Translation factors [BR:
otw03012
]
112267818
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112267818
mRNA cycle factors
Stress granule specific factors
112267818
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112267818
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
112267818
NCBI-ProteinID:
XP_042156345
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All DBs
Position
LG02:49718387..49765648
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AA seq
636 aa
AA seq
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MAAAAKKKGNKKGKTLTLTDFLAEDSGSGGNAPPPQPSYAKSTSWADETDDLEGDVSTSW
HTGEDSYRAPAIDRNILPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYDVSEESIKDFF
RGLAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMAGPDKTDSDDWRARPTANTDDGPPKREESAFGSRDRYGD
RDGLRRDNDRGFGDRDRGFGGRDRYDDRGGENGAFGSRRDRDDGGRRAFGSGYRRDDDDQ
SGGGGGSRYGARDRYGGDREGRYERQDEGREERGEGGPTERPKLILKPRSMAKEEQQAGS
GGAPPAAPAAARISGRASIFGAAKPVDTAAKEREVEEKLQRQLEEDQSKGFDRKPRDRDR
DPSWRNEEPPSERSRTGSESSHPGSTSGGRASRRRESERSVENEVFSGKEDDPPSPVARP
SSANSSTFSSKEPLKVMPAPPPKDNAWAKRPALSTGSGKGCAPISTSDTAPPKLSLSSTN
ERGSNKDENKVDGVHLDRGPPWGRGRAAGRGRGEGANRDRQREEDRKSKRRGRDSRPAPE
PKKYEESPTLKFSSASKYAALLMDREQGDDAENGVE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagctaagaaaaaggggaataagaaggggaagactctgaccctcactgac
ttcctcgcagaggacagtgggagtgggggcaacgctccaccaccgcaacccagctacgcc
aagtccaccagctgggctgatgagaccgatgacctggaaggagatgtgtccacctcctgg
cacacaggggaggacagttaccgggcccccgcaatagaccgtaacatcctgcccacagcg
ccacggtcggcccgtgagcccaatgtggaccgctcacgcctcccacgcagccccccctac
acagccttcctgggcaacctgccctacgacgtctcagaggaatctatcaaggacttcttc
cggggcctagcgatcagtgcggtgcgcttgccacgggagcccagtaacccagagaggctg
aagggctttggctacgcagagtttgacgacgtggactccctcttgagggcgctgactctc
aacgaggagaacttgggaaaccgcaggatccgggtggatattgcagatcagtccaatgac
aaggaggggagagacaatggtcagatgggtggacgagaccggatgggccgcatgggagac
atggcaggccccgacaagacagacagtgatgactggagggcccggcccactgcaaacacc
gacgatggacccccaaagagagaggaatccgcatttgggtcacgcgaccgctacggagac
cgtgacgggctgcgaagggacaacgaccgcggcttcggcgaccgggaccgcggctttggc
ggcagagaccgctatgacgaccggggaggtgagaacggagcctttggctcccgcagggat
agggatgacggagggcgacgtgccttcggcagtgggtaccgccgtgacgatgacgatcag
agtggcggaggtggtggtagccgctatggggcccgggatcgctacggcggagaccgggag
ggccggtacgagaggcaggacgaagggcgcgaggagagaggtgagggtggtcccaccgag
aggcccaagctgatcctgaagccgcgcagcatggccaaggaggagcagcaggccggcagc
ggtggggctcccccagctgctccagcagccgcccgcatctctggtcgagcctccatcttt
ggagcggccaagcccgtggacacagcggctaaggagcgggaggtagaggagaagctccag
aggcagctggaagaggaccagtccaagggcttcgataggaaacctcgcgacagagacagg
gacccaagctggaggaatgaggagccaccttctgagcggtcccgcacaggaagtgagtca
tcacatcccggaagtacctctggagggagagcctcacggcgcagagagagcgagcgctca
gtggagaacgaagtattcagcggtaaggaggacgaccctccctctcctgtggctcgcccc
tcttctgccaactcttccaccttctcctccaaggagcccctcaaggtgatgcctgcaccg
ccacctaaggataatgcctgggccaagcggcctgcattgagtaccgggtccggcaaggga
tgcgcccctatctctaccagtgacacggcacctcccaaactgagcttgagttctacaaat
gaaagaggatcgaataaggacgagaataaagtggacggtgtgcatctggaccggggcccc
ccatgggggagaggtcgggccgcagggcggggccgaggagagggggccaacagagaccga
caaagggaggaagacagaaagtctaaaagaagaggccgagactcaagacctgcaccagag
ccaaagaaatacgaagagtcccccacccttaaattcagctcagccagtaaatacgctgct
ctgctaatggacagagagcaaggagatgacgcagagaatggtgtggaataa
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