Oncorhynchus tshawytscha (Chinook salmon): 112267823
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Entry
112267823 CDS
T05605
Name
(RefSeq) golgin subfamily B member 1 isoform X1
KO
K20478
golgin subfamily B member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112267823
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
112267823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C_2
YfhO
Motif
Other DBs
NCBI-GeneID:
112267823
NCBI-ProteinID:
XP_042153889
LinkDB
All DBs
Position
LG15:4068291..4096050
Genome browser
AA seq
3075 aa
AA seq
DB search
MFSRLSQGFTNVLQELSGDEPPDGAPHDMLVPQLPPGDAPGAPEESGPGVEEEPLERLAH
LEQLTVHLKEVVRDKDSQLATFETQLKSERETAEARFTKLKLQAKAKMATLNKQIADLKG
QEGATSSPDSSFTSSAPAVEEELQELRKQLSEVSTSAKNLEERLQMSEEALCEKEAIHTE
QVRVLQAVVCEKDVRFQEQIQKHEDELLRVTVQSQNDAELQQALRAAQRRCEEQEEAMRS
RCQVLEMLQGELNNADQQKQILTAQFRQMEQELAEAGRQREQELAEAGRQREEERQQWAG
WSSQAEAELVALRANLEASEQDRAAQLANLEGSERDRSTQMEELTVKLECATREREEVTN
REVARLEKELTALREEYGEGQRAGEALAELLTGLRSLAGEGAKEDSPVPTDPAQCLGTLQ
ALEARLERLRVEQRESEERCAQVTHTMETLQEQLDKRTAEGKEAVARIQQLEQQIGMAAR
ESLVQCVTDPSVEEVTDAEKAQILALERQLLEKDHELAALRESLVLAEEQGSNDTFKVRA
DQILDQSEDTAMAPCDSPTVLPDLLEDTREEDTTLVAEDRSILSVSADNESSPELIEPQS
DSPGESKGASSDEMVTSSDSEVAHSSWTLLEAVNQDEGQQSPPILQGFGQLQMQSWEENS
SEQETSTVQVESSSVIIRETVQVHLSQQGATLFDSDSAPGQVFAQALADELQNRYSELMV
ELQRLREAASESQARAQGLEEEIRSLAVAKDEAESQAQRYEEELQSARSEMDTVAQHSAS
DLERQSMKMHLLEEQLASLQTEGRAKEQQIQALQADLDKAQHSLSQQECQARMLSVQLEE
GEITSSELEQKLQDMEASLLDISQARDMAKAVLSERDTEINELQLRITQKEQEMMELSNG
MSAKLLQTGEEKFLMSAEVKKLKEQIIELEKAGEKEKATGESHVEDSDELTSLQKDKEDL
TTQVATIKKRLQAALMQRKELMKKVAEFEKEADQRKGQVGKATEEASASVPALEKDRKQE
VMAIETTLEEFRQALRSKEEVMEVLERKISQQDQVLEETLEMNRRLSEGAQQTPEADTSS
EITGLQSQVASLESDCETLQKKLQEAQDSRKDTIRMAKEKDRHHREQLKQQKEEHNGLLE
RLEEQVGERDGLLTRLRELEELQAQKEGSTEKEVHAELETNAAVEKIEKPAAGDWVQEDW
VDFAAPENEAQQRGDKPIPSAEEPSQVLSADTEASFQALKEEVQAEKAYCTELEGQLQES
QASLSLRESELLALGKELQTLREKESQIEHVYEELEALREKCLQAQTYAEAVKAELEAAA
KGAASDSTESTIAVLQTEVEDFKQFLSNKNDEIMELSQQLGEQSSLLQSMQETVYEKDQS
IASLQEGLRAEKEKSQRLEAEVPQRQEEEKASEAKILQLQQKLKAALISRKEALKENKSQ
KEELASTEKVITELQQRMDAKEVELEKLRAERERLIEEVDRTLVENQSLGGSCESLKLAM
EGMLTEKDFCKREAESAKEEAARACREWEEKVHGMKDEYETLLKSYENVSDEAERVRRVL
EAARQERKELVARARTHEAAKQEAERQKEEAQKEVDTVKDKMRKFAKTKQQKIMDLEEEN
ERLREMDEKKGIRREDKALKGELERLKEELEALKADLNATTAQRDSLEQQVVEVREQLAQ
ELEKGDRLAPDKTPISDDVVEETIVAQQSSTVMTETTQEPVKSQPQDIEPHSQAIESEVA
APEMHSFEETGKNEITESTQALIDVKLSKMEAALQSERELRQEREAELTAELASLEQRLR
ESKEKEQTQGEEPVKTDMSESELATIEGKRREMEAALHSEREQWQESEAELKAGLASLEH
LLQESKDKEQSLMEESSKREAQLQGLHSSLEVEKDDLEERLMNQLAQLNGSIAGYQQDAA
DSRERLAELQREVERLERERAELEALAESERDRAARLEEDKRQAQRERAEAEAESGKQRE
LEQQLKSAQRVKEGSQSRAKQLEELLREKQLEVRQMQKDCIQYQERISEMAREGKALQLG
SNEIHKELGQAYLERTKVTDALKKTEAELSSCKAQLVEAQTEASQAQAERRAYEQTALQR
EAELKAEAEQSLDSVRFRLGAELKQIELRLEESYREREREENATREAKELADTAERQAQQ
MQARLDESLARLAAFSRCMSSLQDDRDRVLDETRQWESRFNSTLQGKEAEVREGETRSRD
LAEQLQKETAQREELQLTVDRLQKADEQWQLKWEQEEKRLRENQAALEQERGELQKSLAQ
TETSLADTRAQLASLESEAEGLRNRAQALEEAVGKLQGETNEVGSQLKEREAEGRRLGLS
VEQLETDLRSSKTLTESLQTELSEKERREVELLGEKEQAVTQAAEEARREADARAQEAEK
ELEERREEVRGLEDRLRKAEEESSHSKARLDAFTKAMGSLQDDRDRVLGMYKQLEEKHLQ
VMMEKDALIQEAAAENNSLKEELRSLLVQRDDLHAEKAKLSAQLHGYRDDLTQVLTMKES
QHKQLLSGQLERIATLEKERAELEAKIKSLEGGEAFVQAVERETLSQAGDSGNRQVRDAP
GAEVEKLREQLQAARAQVESLEESLAKEREVQEARQKELKELRWEGGVTRTESETAAERV
AELARDLLSMEQRLLEEREVAGQLRAQNQAFGQAMASLQGSRDQALSQAQELSLRLEEMS
RAGGQQTPTTGHGGSTAEVWGLKNALSALQNDRERLLEQLQRQHSELTRLGGGELSRLSQ
ELEEEKRRADEMVDRMRELDNLRQRENQELEILRLEQVDWQAQAELLKQQTLATLSDRDQ
QVRQLGAMLEEARATRPKPLEEHHQRQAPLEADLSSKVGVLQSESGPLNDLQLREQRITQ
LSNKSAEPVAVPPSPQLSQVFEENRHLSSQFQGSSQRLDEAESRCTALQRQLQELHEDKR
KRTGEVDSAPGAPQQHSGPSESESLRVDFEELQRRLDEEQQYRVAVEEQLIAAQDRLKLI
NQGEWQSAHEGQFSETSVLIEPPGGSVTRIRSSNGPGLMRMLRVSFCSRQRTPLLVSLYL
LTVHVLLLLCLGGYV
NT seq
9228 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccggctgtcccagggctttaccaacgtcctgcaggagctgtctggggacgag
ccccccgatggagcccctcatgatatgttggtcccccagctcccccctggagatgccccc
ggggcccctgaggagtctgggcctggggtggaggaggagcccctggagaggctggctcat
ctggagcagctgacggtgcatctcaaggaggtggtcagagataaggacagccagctggcc
acattcgaaacgcagctcaagagtgaaagggagacagcggaggcacgcttcactaaactg
aagctgcaggccaaagccaagatggctactctgaacaaacaaattgctgacctcaagggg
caggagggagcaacaagctctccagacagctccttcaccagctcagctcctgctgtggag
gaggaactccaggagctgaggaagcagctcagtgaggtctcgacctcggcgaagaacctc
gaggagcgtctccagatgtccgaagaggccctgtgtgaaaaggaagccatacacacggag
caggttcgtgtgcttcaggcagttgtctgtgaaaaggacgtgcgtttccaggagcagatc
cagaagcatgaggacgagctgctgagggtcacagtgcagagccagaacgacgctgagctg
cagcaggctctacgtgcagcccagcggcgttgtgaggagcaggaggaagccatgcggtca
cgctgccaggtgctggagatgctgcagggggagctgaacaatgccgaccagcagaaacag
atcctcacagctcagttccgccagatggagcaggagctggctgaggctggcaggcagagg
gagcaggagctggctgaggctggcaggcagagggaggaggagaggcagcagtgggctggg
tggtccagccaggccgaggcagagctggtggccctccgagccaaccttgaggcctccgag
caggacagagcagcccagctagccaacctggagggttcagagagagacagatcaacccag
atggaggagctgacagtgaaactggagtgtgccactagagagcgggaggaagtgaccaac
agagaagtagccaggttggagaaggagcttactgccttaagagaggagtatggagagggg
caaagggcaggagaggccctggctgagttgttgacaggcctgcgctctctggctggagag
ggggccaaggaggacagccctgttcccaccgacccggcccagtgcctgggtacactgcag
gccctggaggcccggctggagaggctgagggtggagcagagggagagcgaggaacgctgc
gcccaggtcacccacaccatggagacattgcaagaacaactggataagcgcaccgcagaa
ggcaaagaggcagttgctaggatacaacagctggagcagcaaattggaatggctgctagg
gagtcattggtccagtgtgtgactgacccgtctgtggaagaagtgactgatgctgaaaaa
gcccaaatattggctctggagcggcagctattggagaaagaccatgagttggctgccctg
cgagagagtcttgtgctggctgaagagcagggctcaaatgatacattcaaggtaagagct
gatcagattctagaccagagtgaggacactgccatggccccctgcgacagtcctacagtg
ctgccagacctcctagaagacacgcgagaggaggacaccaccctggtggcagaggatagg
tcaatcctgtcagtctccgctgataacgagagcagtccagagctcattgaaccccagtct
gactctcccggagaatctaagggggcctcctctgatgagatggtcacgagcagtgactcc
gaggtggcccacagcagctggaccctcctagaggctgtgaaccaagatgaaggtcagcag
tcgcctcccatactgcagggctttggccagctccagatgcaatcctgggaagagaacagc
tctgagcaggaaacatccacagtccaggtggagtcctcatcagtcatcatccgtgagact
gtgcaggtgcacctcagccagcagggggcgaccctctttgactctgactctgcccctgga
caggtgtttgcccaggccctagcagatgagctgcagaacaggtacagtgagctcatggtt
gagctccagagactgagagaggctgcctcagagtcacaggcgagagcccaaggccttgag
gaagagattcggtccctggcagttgccaaggatgaggcagagtcccaggcccagagatat
gaggaagagctccagtcagccaggtcagagatggacacggtggcccagcacagtgcctct
gacttggagaggcagagcatgaagatgcatctcctggaggagcagctggccagcctgcag
acagaaggccgcgccaaagagcagcagatccaggccctgcaggcagacctggacaaggct
cagcactctctctctcagcaggagtgccaggccaggatgctgagtgtccagctggaagaa
ggggaaatcacctcctctgagctggagcagaagctccaagacatggaggccagcctactg
gacatctcccaggctagggacatggccaaagctgtactgtctgagagggacacagagatt
aacgagctgcaactgcgcatcacccagaaagagcaggagatgatggagctgagcaatggc
atgtctgccaaactgctccagaccggtgaggagaagttcctgatgagtgctgaagtcaag
aaactaaaggagcagataattgagcttgagaaagctggagaaaaggagaaagcgacaggg
gagagtcatgtagaggatagtgatgagctcactagtttgcaaaaggacaaagaggatctg
acaacccaagtggccaccattaaaaagaggttgcaggcagccctgatgcagcgcaaagag
ctgatgaaaaaagttgcagagtttgagaaagaggcagatcaaaggaaaggacaggtaggg
aaagcaacagaggaagcctctgcaagtgtaccagctttagaaaaagacagaaaacaagag
gttatggcaattgagactactcttgaagagttcagacaagccttgaggtccaaagaagag
gtcatggaggttttggaacggaaaatcagccagcaggatcaggttctggaagagacactt
gaaatgaacagaaggctgagtgagggagctcagcagactccagaggctgacacctcatct
gaaatcactgggttgcagtcccaggtggcctcactggagtcagattgcgaaacactgcaa
aagaaactccaggaggcccaggactctcgcaaagacaccatccgcatggccaaagaaaag
gacaggcaccaccgcgaacagcttaaacagcaaaaggaagagcacaatgggctgttggag
cgtttggaggagcaggttggtgaacgagatgggctgttgactagactgagagagctcgag
gaactgcaggcacagaaagaggggagcacagagaaggaagtccatgccgagctggagacc
aacgctgcagtggagaagattgagaagccagctgcaggagattgggtccaggaagactgg
gtggactttgccgctcctgagaacgaagcacaacaacgaggtgataaacccattcccagt
gctgaggaaccctctcaggtactttcagctgacactgaggcctcatttcaagctctgaaa
gaagaggtccaggctgagaaagcatattgtacagagttggagggccaactgcaggagagc
caggctagcctgtcactcagggaaagtgagcttctagcgctgggcaaagagctgcagacc
ctgagagagaaggagagccagattgaacatgtctatgaggagttggaggctctgagggag
aagtgtctccaggctcagacctatgcagaagctgtgaaagcagagttggaggctgcggcc
aagggagccgcctcagactccactgagtccaccattgccgtcctgcagacagaggtggag
gacttcaagcagttcctgagcaacaagaacgatgagatcatggagcttagccagcagctg
ggtgagcaaagctctctcctccagtccatgcaagagacagtgtatgagaaggaccagtcg
atcgcctccctgcaggaaggcctgagagcagagaaggaaaagagccagagactggaggcc
gaggtcccccagaggcaggaggaagagaaggccagcgaggccaagatcctgcagcttcag
cagaagctcaaggccgcccttatctcccgcaaagaggccctcaaagagaacaaaagccag
aaagaggagttggcctccactgagaaagtcatcactgaactgcagcagaggatggatgct
aaagaagtcgagctggagaagctgagagcagaaagagagaggcttatagaggaggtcgat
cggaccttggtggagaaccagagccttgggggatcctgcgagagcctcaagctggccatg
gagggtatgctgacagagaaagacttctgtaaaagagaggccgagtctgccaaggaggag
gctgcccgggcatgcagagaatgggaggagaaggtgcatgggatgaaggatgaatatgag
actctgctaaagtcctatgagaacgtgagtgatgaggcagagcgtgtgagacgggtgctg
gaagctgctaggcaggagaggaaggagcttgttgctagagccaggacccacgaggcagcc
aagcaggaggctgaacggcagaaagaagaggcccagaaagaggtggacactgtcaaagac
aagatgaggaagtttgccaagaccaagcagcagaaaatcatggatttagaggaagagaat
gagagactccgagagatggatgaaaagaaaggaataagaagggaggacaaggcactcaaa
ggagaacttgaaagactcaaagaagagcttgaggctctgaaagctgatttgaatgccact
acggcacagagggactccttagaacagcaagttgttgaggtgagggaacaactagcccaa
gagctagagaaaggggacagattagctccagataaaacccccatctctgatgatgtagtg
gaggaaactattgttgcccagcagtctagtacagtcatgactgaaactacccaagagcca
gttaagagccagcctcaggacatagagccacatagtcaggctatagaatctgaggtagct
gcacctgaaatgcactcttttgaggagacggggaagaacgaaataactgaaagtacacag
gccctaattgatgtgaaattgagcaaaatggaggcagccctacagtcagagcgggaactg
aggcaagagcgcgaggctgaactcactgctgagctggcctctctggagcagcgccttcgg
gagagtaaagaaaaggaacagacccagggggaggagccagtgaagacggacatgtctgaa
agtgaactggccacaattgagggaaagcggagggaaatggaagcagccctacattcagag
agggaacagtggcaagagagtgaggctgaactcaaggctggactagcctctctggagcac
ctccttcaggagagtaaagataaggaacagagcctgatggaggagagctctaaaagggaa
gcccaactccaggggctccacagcagcctggaggtagagaaggacgacctagaggagcgt
ctgatgaaccagctggcccagctgaatggcagcatcgccggctaccaacaggacgcggca
gacagccgggagcgccttgcggagctgcagcgggaggtggagagactggagagggagcgg
gccgaactggaagccctggccgagagtgagagggaccgggcagccaggctggaggaggac
aagaggcaggcccagagagagagggcagaggcagaggccgagtcagggaagcagagggag
ctggagcagcagctgaagtccgcccagagggtgaaagagggcagccagagccgggcaaag
cagctggaggagctgctgagagagaagcagctggaggtgcgccagatgcagaaggattgc
atccagtaccaggaaaggatcagcgagatggccagggagggcaaggctttgcaactgggc
agcaacgagatccacaaagagcttgggcaagcctatctggagaggaccaaagtcacagac
gctttgaagaagactgaggctgagctatctagctgcaaagcccagctggttgaggcccag
acagaggccagccaggcccaagctgaaaggagagcctatgagcagaccgctctacagaga
gaggctgagttgaaagcagaggcagagcagagcctggactctgtgaggttcaggctggga
gccgagctgaagcagattgagctgaggttggaggagtcttaccgggagagggagagagag
gagaatgccacccgggaggcaaaagagctggctgacaccgctgagagacaggcccagcag
atgcaggcccgccttgatgagtctctggcccgactggctgctttctcgcgctgtatgtcc
tccctgcaggacgacagggaccgcgtgctggatgagacccggcagtgggagagtcgcttc
aacagcaccctccaggggaaggaggcagaggtgcgggagggagagacccgatccagagat
ctggctgaacagctgcagaaagagaccgcacagagagaagagctacagcttacagtggac
agactgcagaaagcagacgagcagtggcagctgaaatgggagcaggaagagaagaggctc
cgtgagaaccaggctgccctggagcaggagaggggagagcttcagaagtccctagcccag
actgagacctccctggctgacactcgcgcccagctggcttccctggagagcgaggcggag
gggctccgcaacagagcccaggccctggaagaggcagttgggaagctgcagggagagacc
aatgaggtcgggtcccagctgaaggagagggaagcagaggggaggaggctgggcctgagc
gtggaacaactggagacagacctgcgctcatccaagaccctgacagagagtctgcagaca
gagctgagtgagaaggagaggagagaggtagagctgctgggagagaaggagcaggccgtg
acacaggctgcagaggaggccaggagggaggctgacgccagggcccaggaggctgagaag
gagctggaggagaggagagaggaggtgcggggtctggaggaccggctgcggaaggcagag
gaggagagcagccacagcaaagccaggctggacgccttcaccaaggccatgggctcttta
caggacgacagagacagagtacttggcatgtacaaacagctggaggagaaacatctgcag
gtgatgatggaaaaggacgctctgatccaggaggctgctgcggagaataacagtctgaag
gaggagctgcgctccctattggtccagagggacgacctccacgcagagaaggccaagcta
tctgcccagcttcacggctacagggacgaccttacccaggtcctcaccatgaaggagtcc
cagcacaagcagctcttgtccggccagctggagcgcatcgcaaccctggagaaggagaga
gctgagctagaggctaagatcaagagcctggagggaggggaggcttttgttcaggcggtg
gagagggagacactcagccaggctggtgatagtggaaacaggcaggtgagagacgctccc
ggggcggaggtagagaagctgagggagcagctgcaggctgccagggcccaggtggagagc
ctggaggagagccttgccaaggaaagagaggtgcaggaggctcggcagaaggagctgaaa
gaactgcgttgggagggaggggtgacgcgcacagagtcggagacagcggccgagagggtg
gctgagctggcccgagacctgctgagcatggagcagaggctgctggaggagagggaggtg
gccggccagctccgggcccagaaccaggcgttcggccaggccatggcgtcactgcagggc
agcagggaccaggcactcagccaggcccaggagctcagcctcagactggaggagatgagc
agggcagggggccagcagacacccaccacgggccatggaggatccactgcggaggtgtgg
ggactgaagaacgccctgtcagccctgcagaacgacagggagagactgttggaacagctc
cagcggcagcactcagagctcactcgactgggaggaggagagctgtctagactcagccag
gagctagaggaggagaagaggagggctgatgagatggtggacaggatgagggagctagac
aacctgaggcagagggagaaccaggaactagaaattctcaggctggagcaggttgactgg
caggcccaggcagagctcctgaagcagcagaccctggccaccctctcagaccgtgaccag
caggtgcgccagctcggtgccatgttggaggaggcccgcgccaccaggcccaaaccactc
gaggaacaccaccagagacaggcacctcttgaggcagacctgtcatctaaagtaggggtc
cttcaatcagagagtggcccgctgaatgatcttcagctgcgagagcagcggattacacag
ctcagtaacaagtctgctgagcccgttgctgtccctccctcccctcagctctcgcaggtg
tttgaggagaaccgccatctctcctcccagttccaaggcagttcccagaggctggatgag
gccgagagccgctgcactgccctccagaggcagctccaggaactgcatgaagacaagcgc
aagaggacaggggaagtggacagtgcccccggagctcctcagcagcacagtggcccttca
gagagcgagagcctcagggtggattttgaagagctccagcgcagactggatgaggagcag
cagtatagggtggctgtggaggagcagctaatagccgcccaggaccgcctcaaactgatc
aaccagggtgaatggcagtcggcccatgaagggcagttctctgagacatctgtcctcatt
gagccaccaggaggctctgtcacccgaattcggagcagcaacggaccaggcctgatgaga
atgctgcgtgtgtccttctgctctcgccagcgcacacccctgctggtgtccctctacctg
ctcaccgtgcacgtgctgctactgctctgcctggggggttacgtttag
DBGET
integrated database retrieval system
