Oncorhynchus tshawytscha (Chinook salmon): 121838610
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Entry
121838610 CDS
T05605
Symbol
rbm12bb
Name
(RefSeq) RNA binding motif protein 12Bb
KO
K24526
RNA-binding protein 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
121838610 (rbm12bb)
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121838610 (rbm12bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
121838610
NCBI-ProteinID:
XP_024244367
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MAVVIHLQGLRITAGSEDVRNFFTGLKIPDGGVHIIGGEREEAFIIFASDEDARRAMTRS
EGSIKGFPVHLRLSSKSEMQAVLKQSIKPEVTKKRPYKEGFRRPEREGRNEEPGRKELVK
MGSRSGSYSNVRSQARKPSSQPISQDDLYLLMQGMPFTTNEDDVKEFFSGLEVEDIIIMR
NDDGQPNVKGIVKFKSRRDAREGLKRNRHYIGTRFVELDACSEEQYFKADVGREQMLAWN
SSGTFRRGPSSAPTERSPPDRARSFSPVAYRSKSPSPSNDEFCVLVENLPYLVEKRDIKE
IFIHADLKYDQILHLLDKYGSETRSAFVLFNNLRDYGAALTLHKKKFLKRCVYISPISKE
KMVTMLESGGNTMEGTPPSERSCSRSQERPPRETEKDVYESEKICLYVRNLPFDVRKVEI
VDFFLGFRISEEAVVLLLDHKGNGLGEALVIFQTEEEAMRAQSLNGQGFLGTNLILKCIS
LAQMREFGVGEPAVKEQKIERSSERYLARNSEAMSHLYTDYRVNPDIGHLPMNDLQVHIH
GGSSLGLDSQMMESPVLLDNRGNGSAHRHGGYGPSAPQQFDGPTCLKLVNLPSTIRIDEI
YDFCYGYRVIPGSVSLQYDNKGIPKGSATVVFGSRLEALTAVEELSGRPIGSRKVKLVFV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtcatccatttacaggggctcagaatcactgcaggttctgaggatgttcgc
aatttcttcactggcctcaaaatcccagatggtggggtgcacattattggtggggagcgt
gaggaggctttcataatctttgcttccgatgaagacgcgaggcgggcgatgacccgttcg
gagggatccatcaaaggttttccggttcacttacggctgagcagcaagtcagaaatgcag
gccgttctcaagcaaagtataaaacccgaggtgaccaaaaagaggccgtataaggaaggt
ttcagaagaccggaaagagaaggcaggaatgaggaacctggaagaaaagagcttgtaaag
atgggcagtagatcagggtcttacagtaatgtacgtagtcaggcccgaaagccttcctca
cagcccatcagtcaagatgacttgtatttgcttatgcaaggcatgccttttactacgaac
gaagacgacgtgaaagaattctttagcggattagaggtggaggacattattataatgaga
aatgacgacggccaaccaaatgtgaaaggaattgtcaagttcaaatccagacgggatgct
agagagggtctgaaaagaaatcggcattacattggaactaggtttgtggaactcgatgca
tgctcagaagagcagtattttaaggcagatgttggtagggaacagatgttggcatggaac
agcagtggtacgtttagaagagggccttcctcagctcccactgagaggtctcctccagac
cgtgctaggtctttctcaccagtggcctacaggtctaagtccccttctccttccaatgat
gagttctgtgtcttggtggaaaaccttccctacttagtggagaagagggacataaaggag
atcttcattcatgcagacctcaagtatgatcagatccttcaccttcttgacaagtatggg
tcagagacaaggtccgcatttgtgctgttcaacaacctgagggactacggtgctgccttg
actcttcacaagaagaaatttctcaaacgatgtgtgtacatctctcctatctcgaaagag
aaaatggtcaccatgctagaatctggggggaatacaatggagggcacaccaccctctgaa
aggtcttgcagccgatctcaggaaaggcctccaagagagaccgagaaggatgtgtatgaa
tctgagaagatttgcctgtatgtgcgaaacctacctttcgacgtgcgcaaagttgagatt
gtggacttcttcctaggcttcagaatctcagaggaggctgttgttttgctgcttgaccat
aagggcaatgggcttggagaggctttggtgatctttcagactgaggaggaggctatgagg
gcacagtctctgaatgggcaagggtttcttggaacaaatctcatcctgaaatgcatttct
ctggctcagatgcgtgaatttggtgttggtgaacctgcagtgaaagagcaaaagatagag
agaagctcagagaggtacctggccaggaacagtgaggcgatgtcccatctgtacactgat
tacagggtaaaccctgatataggccatcttcctatgaacgacctgcaggttcatattcat
ggaggcagcagtctgggtctcgattctcaaatgatggaaagccctgttctgcttgacaac
cggggcaatggctctgctcatagacatggaggctatggaccttctgcaccgcagcagttt
gatggtccaacatgcctgaaactggttaatctgccttcgactatcagaattgacgaaatc
tatgacttttgctatggatatcgtgtaattcctggatcggtctcattgcagtatgacaac
aaagggattcccaaaggctcagcaacggttgtttttggatctcgcttggaggcgttaacg
gcagttgaggaattgagtggaagaccaataggcagcagaaaagtaaaactagtgtttgtg
tga
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