Oncorhynchus tshawytscha (Chinook salmon): 121838672
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Entry
121838672 CDS
T05605
Name
(RefSeq) neurofilament medium polypeptide-like isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
121838672
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121838672
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Homez
Motif
Other DBs
NCBI-GeneID:
121838672
NCBI-ProteinID:
XP_042158312
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Position
LG20:23309522..23315027
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AA seq
873 aa
AA seq
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MSYHPVDTIGSPFRRSMDSRTTYGRSTGTPSSGFRSQSWSRASPGSTMTSSFKRSVNMPV
ARAYSSTLLSSADSVDFNQTNGDYKRSNEKEQLQGLNDRFAGYIDKVHYLEQQNSQIEEE
IQTLRQKQVSQSQLGDLYDQELQELRSMLEQIHHDKAQIQLDTDHIEDDIQRIRDRFDEE
ARIRDETEGIIRALKKDMTDSDLVKSEFEKKVQSLHDEIAFIRNNHEEEVSDLFAQVQAS
QVTMERKDIQKTDITEALREIRTQLEGHSNQNLQQVEDWFMCRYSKLTDAAAQNKDAIKS
ARDEIADYRRQLQSKTVELESVRGTRESLERQLNDIEDRHNNDLSSLQETIHQLDNELKG
TKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRHTVTSSKKSNYEPP
KLKVQHKFVEEIIEETRVEDEKDEMDQALAEVAQEFSATLEAEATDEGEDEGEEGGEEAE
GEGGEGESEEVVASTEAEVSSSTPAEEEEEDKEGDDEEEEGEKEEEGEKGEEGEGEKGDD
TEGGDEGEGEGELEETVLCSKAPESKASPDKEKAGEKEGSGGEEETGEGEGEEEGDDQDE
DAGSDKGCKDGDDKDEEDEKKGKDEKEDKTDEKAAVAKTEAPKTEAPKSEAPKVEDQKSE
SPKPSKPDSLKAESPKAGSPKSESPKAGSPKSESPKPSGSPKSESPKPAGSPKSESPKPA
GSPKSESPKPAGSPKSESPKPAGSPKSESPNLLDPPNLNPQNLLGPLNLNPQNLLDPLNL
NPQNLLDPLNLNPQNLLDPLLLNPPNLLDPLNLNPQNLLDPLLLNPQNLLDPQNLNPQNL
LDPLNLNPQSLLDPPLLNAQNLLDPQICWIPQI
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccacccggtggacacgatagggagtccgttcaggagaagtatggatagtagg
accacctacggccgctccactggcaccccctccagcgggttccgttctcagtcctggtcc
cgggcaagcccaggctccacgatgacctcctccttcaagaggagcgtcaatatgccggta
gccagagcgtacagctccacactcctcagctccgccgacagcgttgatttcaatcaaacg
aacggagactacaagcgctccaatgagaaagagcagctccaggggctcaacgaccgcttc
gccggttacatcgacaaggtgcactacctggagcagcagaacagccagatcgaagaggag
atccagacgctgcggcagaagcaggtgtcgcaatcccagctaggcgatttatacgaccag
gaactccaggagctgcgctccatgctggagcagattcaccacgataaagcgcagatccag
ctcgacacggaccacatcgaggatgacatccagagaattagggaccgcttcgatgaggaa
gcccgcatcagggatgagacggaaggcatcatccgggcgttgaaaaaagatatgaccgac
tctgatttggtgaagtcagagtttgagaagaaagttcagtcactgcatgacgagattgcc
tttatccgcaacaaccacgaagaagaggtgagcgacctgttcgcccaggtgcaggcgtcg
caggtgaccatggagaggaaagacatccagaagacggacatcaccgaggcgctccgggag
atccgcacccagctcgagggccactccaaccagaacctgcagcaggtggaggattggttc
atgtgccgctattccaagctcactgatgctgcggcacaaaacaaagatgcaatcaagtcc
gcccgtgatgagatagcagactaccgtcgccagcttcagtccaagaccgtggagttagag
tccgtccgtggaaccagggagtcactggagaggcagttgaatgacatcgaggaccgacac
aacaacgacctgtccagcctgcaggagaccatccaccagctggataatgagctcaagggc
acgaagtgggagatggcgcgtcatctgcgtgagtaccaggacctgctcaatgtgaagatg
gccctcgacattgagattgctgcatacaggaaactcctagaaggtgaagagacccacttt
agcactttcccctaccgccacactgtcacctcctctaagaagtccaattatgagcctccc
aaactgaaagtccagcataagtttgtagaggagatcatcgaggagaccagggtagaggat
gagaaggatgagatggaccaggccctggctgaggtggcccaggagttttctgccactctg
gaggcagaggcaacagatgaaggagaggatgagggagaagagggaggagaagaagcagag
ggagaagggggagagggtgaatcagaagaggttgtagcctccactgaagccgaagttagc
tcgagcacacctgctgaggaggaagaggaggacaaagaaggtgatgatgaagaggaagag
ggagaaaaagaagaagagggtgagaaaggagaagagggtgagggtgagaagggagatgat
acagaaggtggtgatgaaggagaaggagagggggaattagaggagacagttctgtgctct
aaagccccagaatcaaaggcctctcctgacaaagagaaggctggagagaaggagggaagc
ggaggagaagaggagacaggagagggagagggagaagaggagggtgatgatcaagatgaa
gatgcaggtagtgacaaaggatgcaaagatggagatgataaggatgaggaagatgagaag
aaaggaaaggatgagaaagaagacaaaacagatgagaaggcagctgtagccaagacagag
gctcccaaaacagaagcccccaagagtgaggccccaaaagttgaggaccagaaatctgag
tccccaaagccctccaagccagactccctaaaagctgaatccccaaaggctgggtccccg
aagtctgagtccccaaaagctggatcccccaaatctgaatccccaaaaccttctggatcc
cctaaatctgaatccccaaaacctgctggatcccccaaatctgaatccccaaaacctgct
ggatcccccaaatctgaatccccaaaacctgctggatcccccaaatctgaatccccaaaa
cctgctggatcccccaaatctgaatccccaaacctgctggatcccccaaatctgaatccc
caaaaccttctgggtcccctaaatctgaatccccaaaacctgctggatcccctaaatctg
aatccccaaaacttgctggatcccctaaatctgaatccccaaaacctgctggatccccta
cttctgaatcccccaaatctgctggatcccctaaatctgaatccccaaaacctgctggat
cccctacttctgaatccacaaaacctgctggatccccaaaatctgaatccccaaaacttg
ctggatcccctaaatctgaatccccaaagcctgctggatcccccgcttctgaatgcccaa
aacctgctggatccccaaatctgctggatcccccaaatctga
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