Oncorhynchus tshawytscha (Chinook salmon): 121838748
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Entry
121838748 CDS
T05605
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
121838748
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121838748
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Homez
Motif
Other DBs
NCBI-GeneID:
121838748
NCBI-ProteinID:
XP_042158316
LinkDB
All DBs
Position
LG20:23337501..23342588
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AA seq
985 aa
AA seq
DB search
MSYHPVDTIGSPFRRSMDSRTTYGRSTGTPSSGFRSQSWSRASPGSTMTSSYKRSVNMPV
ARAYSSTLLSSADSVDFNQTNGDYRRSNEKEQLQGLNDRFSGYIDKVHYLEQQNSQIEEE
IQTLRQKQVSQSQLGDLYDQELQELRSMLEQIHHDKAQIQLDTDHVEDDIQRIRDRFDEE
ARIRDETEGIIRALKKDMTDSDLVKSEFEKKVQSLHDEIAFIRNNHEEEVSDLFAQVQAS
QVTMERKDIQKTDITEALREIRTQLEGHSNQNLQQVEDWFTCRYSKLTDAAAQNKDAIKS
ARDEIAAYRRQLQSKTVELESVRGTRESLERQLNDIEDRHNNDLSSLQETIHQLDNELKG
TKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYHHTITSSKKSKYEPP
KLKVQHKFVEEIIEETRVEDEKDEMDQALAEVAQEFSATLEAEATDEGEDEGEEGGEEAE
GEGGEGESEEVVASTEAEVSSSTPAEEEEEDKEGDDEEEEGEKEEEGEKGEEGEGEKGDD
TEGGDEGEGEGELEETVLCSKAPESKASPDKEKAGEKEGSGGEEETGEGEGEEEGDDQDE
DAGSDKGCKDGDDKDEEDEKKGKDEKEDKIDEKAAVAKTEAPKTEAPKSEAPKVEVQKSE
APKPSKPDSLKAESPKAGSPKSESPKAGSPKHESPKAVTPKSESPKPSGSPKSESPKPAG
SLKSESPKPSGSPKSESPKPAGSPKSESPKLAGSPKSESPKPAGSPASECPKPAGSPKSA
GSPKSESPKPAGSPKSESPKLTGSPKSESPKTTGSPKSESPKLGSPEAESPKGEFPKPEA
PTSEAPKAAEEKVDKNSDSEEEMKVEKKDAAMNGNVDKITPEDKDKKDEGGKEAEEKDVI
SNGVDVSPTKDDPDQKDDPKDQKVVITKTVETITTGEDGAKHVTKSVTVTETVKESEDVM
QEKTVSSKKMEKHSSQSVKVVTETE
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccacccggtggacacgatagggagtccattcaggagaagtatggatagtagg
accacctacggccgctccactggcaccccctcaagcgggttccgttctcagtcctggtcc
agggcaagcccaggctccacgatgacctcctcctacaagaggagcgtcaatatgccggta
gccagagcgtacagctccacactcctcagctccgccgacagcgttgatttcaatcaaacg
aacggagactacaggcgctccaacgagaaagagcagctccaggggctcaacgaccgcttc
tccggttacatcgacaaggtgcactacctggagcagcagaacagccagattgaagaggag
atccagacgctgcggcagaagcaggtgtcgcaatcccagctaggcgatttatacgaccag
gaactccaggagctgcgctccatgctggagcagattcaccacgataaagcgcagatccag
ctcgacacggaccacgtcgaggatgacatccagagaattagggaccgcttcgatgaggaa
gcccgcatcagggatgagacggaaggcatcatccgggcgttgaaaaaagatatgaccgac
tctgatttggtgaagtcagagtttgagaagaaagttcagtcactgcatgacgagattgcc
tttatccgcaacaaccacgaagaagaggtgagcgacctgttcgcccaggtgcaggcgtcg
caggtgaccatggagaggaaagacatccagaagacggacatcaccgaggcgctccgggag
atccgcacccagctcgagggccactccaaccagaacctgcagcaggtggaggattggttc
acgtgccgctactccaagctcactgatgctgcggcacaaaacaaagatgcaatcaagtcc
gcccgtgatgagatagcagcctaccgtcgccagcttcagtccaagaccgtggagttagaa
tccgtccgtggaaccagggagtcactggagaggcagttgaatgacatcgaggaccgacac
aacaacgacctgtccagcctgcaggagaccatccaccagctggataatgagctcaagggc
acgaagtgggagatggcgcgtcatctgcgtgagtaccaggacctgctcaatgtgaagatg
gccctcgacattgagattgctgcatacaggaaactcctagaaggtgaagagacccacttt
agcactttcccctaccaccacaccatcacctcctctaagaagtccaagtatgagcctccc
aaactgaaagtccagcataagtttgtagaggagatcatcgaggagaccagggtagaggat
gagaaggatgagatggaccaggccctggctgaggtggcccaggagttttctgccactctg
gaggcagaggcaacagatgaaggagaggatgagggagaagagggaggagaagaagcagag
ggagaagggggagagggtgaatcagaagaggttgtagcctccactgaagccgaagttagc
tcgagcacacctgctgaggaggaagaggaggacaaagaaggtgatgatgaagaggaagag
ggagaaaaagaagaagagggtgagaaaggagaagagggtgagggtgagaagggagatgat
acagaaggtggtgatgaaggagaaggagagggggaattagaggagacagttctgtgctct
aaagccccagaatcaaaggcctctcctgacaaagagaaggctggagagaaggagggaagc
ggaggagaagaggagacaggagagggagagggagaagaggagggtgatgatcaagatgaa
gatgcaggtagtgacaaaggatgcaaagatggagatgataaggatgaggaagatgagaag
aaaggaaaggatgagaaagaagacaaaatagatgagaaggcagctgtagccaagacagag
gctcccaaaacagaagcccccaagagtgaggccccaaaagttgaggtccagaaatctgag
gccccaaagccctccaagccagactccctaaaagctgaatccccaaaggctgggtccccc
aagtctgagtcaccaaaagctggatcccccaaacatgaatctcctaaagctgtaaccccc
aaatctgaatccccaaaaccttctggatcccccaaatcggaatccccaaaacctgctggt
tccctcaaatctgaatccccaaaaccttctggatcccccaaatctgaatccccgaaacct
gctggatcccctaaatctgaatccccaaaacttgctggatcccctaaatctgaatcccca
aagcctgctggatcccccgcttctgaatgcccaaaacctgctggatcccctaaatctgct
ggatcccccaaatctgaatccccaaaacctgctggctcccccaaatcggaatccccaaaa
cttacaggatcccccaaatcggaatccccaaaaactacaggatcccccaaatctgaatcc
cccaaattaggatcccccgaggcagagtcccctaagggtgagttccccaaaccagaagct
ccaacatccgaggcccccaaggctgcagaagagaaagtagacaaaaatagtgattcagag
gaagagatgaaggtagaaaagaaagacgcagccatgaacggaaatgtggacaagattacc
ccagaggacaaggacaagaaggatgagggtgggaaagaggcagaggagaaggatgttatc
tcaaatggagtggacgtgagccccactaaagatgacccggaccagaaagatgatccaaag
gaccagaaggtggttatcaccaaaacggtggagaccatcaccactggagaggacggggcc
aagcatgtcaccaaatcggtcactgtcaccgagactgtgaaggagtctgaggatgtgatg
caggagaagacagtctccagcaagaagatggagaaacactcttcccagtccgtcaaggtg
gtgactgaaactgagtaa
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