Oncorhynchus tshawytscha (Chinook salmon): 121838805
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Entry
121838805 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 2B-like
KO
K20166
TBC1 domain family member 2B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121838805
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121838805
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
TMF_TATA_bd
LMBR1
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
121838805
NCBI-ProteinID:
XP_042178946
LinkDB
All DBs
Position
LG01:641511..709971
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AA seq
806 aa
AA seq
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MERVRSDFAMETDTDGLVGVQSVRGPSHHPPNPLNFSSKLGHWSSEIRNSMSGLRVGRGG
GENRRSVFYTGSSGDEWEMLDAPSTKDINQDHKPPTQPQTDSHRHSIGSPFTFDFGRSSS
SSLRPKRPTLRDIMGSGRLGRSTESSSPSSQTTPPVECNGSRTNELQLRLQSQEQELTRL
HEENNNLTEELTSQKELVRLLQQTLRSTQREMRPAPLLTPVPASPPAPGFPQSDLAQMEA
LLLDRDGQVQALCCQIERLALEKESLQRELKGLKVKVGEINEQLSMLMETIQAKDEVIIK
LSQTPQGADGTTPCCRTAAQLHPASQQQEINNLKDSVQGYKSQNKFLNKEILELTILLRN
AEARERSLEVKYVALEAKVCQVESKYLVLLQDLKNPVCSSSEQSPAREVISRLLEDALNN
TDPTGHAVFKPHPVSEYDVFGFKTVPEEDDEEEKLVAKVRALDLPSLSLVTDPEVSVGVK
WENYLSTMNRDMACSTQVQGXERAHTPYSPRSKVWRWCVSYHTRKFRDSLAPNYYETLLG
VARDKPNPASKQIELDLLRTLPNNKHYSSPGADGIQKLRNVLLAFSWRNPDIGYCQGLNR
LAAIALLYLDQEDAFWCLITIVEVFMPQDYYTKTLLGSQVDQRVFKDLLSEKLPRLHAHF
DLYKVDSSLITFNWFLVLFVDSVNSDLLFKIWDAFLYEGPKIIFRFALALFKYKEEEFLK
LQDSMAIFKYLRYFTITILDWRKLMSIAFVDMNPFPLRQILNRRTFHLEKVRLELTELEA
IRQTFLRERDTHTDAGALCSDDEEDN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggagagggtacgcagcgactttgctatggaaacagacacggacggactggtgggtgtc
caatcagtacgaggcccctcccaccacccccccaatcccctcaacttctccagcaagctg
ggccactggagctcagagatcaggaactccatgtcaggtctgcgtgtgggtcgaggagga
ggagagaacagacgctctgtcttctacactgggagcagtggtgatgagtgggagatgtta
gacgctccctcaaccaaggacatcaaccaggaccacaaacctcccacccagcctcagact
gactcacacagacactccattggttctccattcacatttgacttcgggcggagcagcagt
tcctcgttgcggcccaagcggcccactctgcgggacataatgggttcagggaggttagga
cgcagcacagagagctcttccccctcttctcagaccacacccccagtggagtgtaacggc
agcaggaccaatgagctgcagctccgcctccagagccaggaacaggaactgacacgcctc
cacgaggagaacaacaacctgactgaggagttaacctcccagaaggagctggtcagactg
cttcagcagaccttgaggagcacccagagggagatgcgaccagcgccactattaactcca
gtacctgcctcacctccagccccagggttcccacagtcggacctagcccagatggaagcc
ctcctcctagacagggatggtcaggtccaggccctgtgctgccagatagagcgtctagcc
ctggagaaggagagtctacagagggagctgaaaggactgaaggtcaaggttggggagatc
aatgagcagctgagcatgctgatggagaccatccaggccaaagacgaggtcatcattaaa
ctgtcccagacaccccagggagcagacgggaccaccccctgctgcaggactgcagctcag
ctccaccccgccagccagcaacaggagataaacaaccttaaggacagtgttcaaggctat
aaatcccagaacaagttcctgaataaggagatcctggagctgactattctactaaggaac
gctgaggccagggagagatctctggaggttaagtatgtggcgttggaggctaaagtgtgt
caggttgagagtaagtacctggtgctgcttcaggacctgaagaacccagtgtgttcctct
tcagaacagagtcctgccagggaggtcatctctagactgttggaggatgcactgaacaac
actgaccctacgggacacgccgtctttaagccacaccctgtcagtgagtacgatgtgttt
ggcttcaaaacagttccagaggaggatgatgaagaggagaagctggtagccaaggtgaga
gctctggacctgccctccctgtctctggtaacagaccctgaggtgtcagtgggggtgaag
tgggagaactatctctctactatgaacagagacatggcgtgctccacgcaggtacaggga
taggagagggctcatacaccttatagccccaggtccaaggtgtggcgctggtgtgtgtcc
taccacaccaggaagttccgtgacagcctggctccaaactactacgagaccttactgggt
gtggccagagacaagcctaatcccgcctccaaacagatagagcttgacctgctgaggacc
ttacctaacaacaaacactactcctcccccggcgccgacggaatacagaaactacgtaat
gtcctgctagccttctcctggaggaaccctgacataggatactgccagggactcaacagg
ctggcagccatagctctgctgtacctggaccaggaggatgctttctggtgtctcatcact
atcgtggaggtcttcatgccccaggactactacaccaagaccctgctgggatcacaggtg
gaccagcgtgtttttaaggacctgctgagtgagaagctgcccagactccacgcccacttt
gacctctacaaggttgactcctccctcattaccttcaactggttcctggtcctcttcgta
gactcagtgaactctgacctcctcttcaagatctgggatgccttcctgtacgagggaccc
aagatcatcttccgcttcgccctcgctctcttcaagtacaaggaggaagagtttctgaag
cttcaggactccatggccatcttcaagtacctccgctatttcaccataactatcctggac
tggaggaagttgatgagcatagcgtttgtggacatgaatccgttccccctgagacagatc
cttaaccgcaggaccttccatctggagaaggttagactagagctgacagagctagaggcc
atcagacaaaccttcctcagagagagagacacacacaccgacgcaggcgcgctgtgtagc
gacgatgaggaggacaactag
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