Oncorhynchus tshawytscha (Chinook salmon): 121838807
Help
Entry
121838807 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 2-like
KO
K17908
autophagy-related protein 18
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136
Autophagy - other
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121838807
04136 Autophagy - other
121838807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121838807
03029 Mitochondrial biogenesis [BR:
otw03029
]
121838807
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121838807
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121838807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
121838807
NCBI-ProteinID:
XP_042170672
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MNLASQSGETGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAAVVFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVCVSVSLAFS
MEGLYLSASSNTETVHIFKLETQKEKPTEEPTTWGGYFGKVLMASTTYLPSQVTEMFTQG
RAFATVRLPFSGHKNICALALIQKIPRLLVAAADGYLYLYNLDPQXGGECTLMKQHRLDG
SAEPPNEILEQGSHDRPLTAQTYNTAGMKGYCEEAGAVGGAGLEDDLSDLRLDDENEEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggctagtcagagcggggagaccggctgtagccagctcctcttcgccaacttt
aaccaggacaacacgtctttagctgttggaaccaaatcaggctacaagttcttctcccta
tcgtctgtggacaagttggagcagatttatgaatgtacggacacagaggatgtgtgtatt
gtagagcgtctgttcagcagtagtctggtggcgatcgtcagtctgaaggctcctaggaag
ctgaaggtctgtcacttcaagaagggaacggagatctgtaactatagttacagtaacact
atactggctgtcaagctcaacagacagaggctgatagtatgtctggaggaatctctgtac
atccacaacatcagagacatgaaggtcctgcacaccatcagagagacacctcccaacccc
tcagggttgtgtgctctctccatcagtaatgataactgttacctggcctaccccggcagt
gctacaataggagaggtccaggtgttcgacacggtcaacctgagggcagccaacatgatc
ccagcccatgacagtccattagcagctgtggtgtttgatgctagcggaaccaaactggcc
acagcctctgagaagggtacggtgattcgtgtgttctccatccctgagggacagaaactg
tttgagttccgtcgaggagtcaaaaggtgtgtatgtgtatctgtttccctggccttcagt
atggaaggcctctacctatcagcatccagtaacacggagacggtccacatcttcaaacta
gagacgcagaaagagaagccaacagaggagccgacgacatggggtggatactttgggaag
gtcctgatggcgtccaccacctacctgccctctcaggtgacagagatgttcactcaggga
cgagccttcgccaccgtacgactgcccttctctggacacaagaacatctgtgctctggcc
ctgatccaaaagattcctcgtctcctggtagcagcagctgatggatatctgtacctctat
aacctggacccacagngagggggagagtgtaccctgatgaaacaacacaggttagacggc
agtgctgagccgcccaatgagatcctggaacaggggtcacatgaccgaccccttactgca
cagacctacaacaccgctgggatgaaaggttactgtgaggaggcgggtgccgtgggaggg
gcgggactagaggatgacctcagcgatctgcgattggacgatgagaatgaagagcagccg
ccactcatcctggagacggactga
DBGET
integrated database retrieval system
