Oncorhynchus tshawytscha (Chinook salmon): 121839582
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Entry
121839582 CDS
T05605
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
121839582
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
otw04031
]
121839582
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121839582
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
121839582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121839582
NCBI-ProteinID:
XP_042154611
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Position
LG16:1305872..1331151
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AA seq
279 aa
AA seq
DB search
MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDIANRWSFEGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWKPNRVFTLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANASGGSKGNSLKRSKSIKPPQSPPQNCTRNNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggtacccagggcagcccggtgaagagttatgactacctgttgaagttcctcttggtc
ggggacagcgatgtggggaaaggggagatactagacagcctacaggatggatcggcagag
tctccgtacgcgtacagcagtggcatcgactacaagaccaccactattctgctggatggg
aggagagtgaaactggagctgtgggacacgtcaggacaggggaggttctgcaccatcttc
aggtcctactccagaggggctcaggggatcctgctggtgtatgacatcgcaaaccgctgg
tcgtttgaaggcatcgaccgctggatacgagagattgacgagcatgccccgggtgtacct
cgtatcctggtaggcaaccggctccacctggcgttcaagcgtcaggttcctacggagcag
gcccgggcgtacgcggagaagaacggcatgaccttctttgaggtcagcccgctctgcaac
ttcaacgtcatcgagtcgttcacagagctgtctcgcatcgtactgatgaggcacggcatg
gagaagttctggaagcccaacagagtcttcactctccaggacctgtgctgcagagcgatt
gtctcctgcacgcccgtccacctgatcgacaagctgccgttgcccgtggcgataaagtcc
cacctcaagtccttctctatggccaatgggatgaacgcagtgatgatgcacggacgttcc
tattcgctggccaacgcgtcgggcgggtctaaagggaacagtctgaagcgttctaaatct
atcaaacccccccagagccccccacagaactgcacacgcaacaactgtaaaatctcctag
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