Oncorhynchus tshawytscha (Chinook salmon): 121839773
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Entry
121839773 CDS
T05605
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
121839773
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121839773
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GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_5
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
121839773
NCBI-ProteinID:
XP_042156135
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All DBs
Position
LG17:complement(13002867..13009045)
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AA seq
941 aa
AA seq
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MRAMFSLFLLIQSVSGWMHPKCHVYNTGEYFPTWNYCPLAEQYTAACRDVTAIEEDLLGL
PSNINTLCISMKRGGNSSMSLGFFARFQYLEYLFIGGCFPQILPAGNSQGLQNLQHMHIN
GLVTGCCDCHIGPNTFRDLVKLSNLTIFGYRLSAMAPDVFHYIPQLQSVYIHEPCVENLS
EILCRIVHIISLTKLNVHAPNIQSLNQSNCSILKATESNLTSVNLDFGQINHIEEGALAC
LQNLTRFSGGLNQDVLLRLPLSGIKQIQVLYSYGRNSIDFESICNVVFLLSIKEIHFANV
NTSSLSMSSVELCIGLEYMGFDGPGPFHSSPHLKLNFISSLKNLKMLYVSGQTENSLDLC
SFRKQPITWLTELTFMSSNVQTLFAKRFSCLENLRSLDLSCSFISNIEDFAFFGLANLES
LHMTQNSITQLYANTFIGLHSLTLLDLRENPQIYNIETMSFAKLTCLRQVFLGYLNYPPR
EPVIKLNLTLVFGDVLSHLTHLHISSGIRPMQLIIGSNITSKQNLSLQLKGQTVSFEDCD
RPFFQSVTHLHADAEEFLCGSEFMGKYFRSVETFVYRSKLSAKSVDLTSMNQLIHLRKLT
LVQVDLLIQRSADIIFHNLTKLEVLKLSNCRIDSLEGGLTKDFKSLKTLYLRIENIYNVI
YSFTEHLSSLKYLILDTLQMFCSCDNAWLIAWAKGYRPVEVIMLNHEVMYNLEDLICLSD
NGLDTPNFVKYTEANCTTEVGFVLFAATGLGVIFFMLVVLVHNLTGPYLLPLYYIILGWL
SEAMRSNTRGRYHYDAFVSYSGKDERWLVEELLPNLEKRGPPFLRLCLHSRDFQLGKDIV
ENITDSLYRSRRTLCLVSRHYLHSNWCSLEMKLATSRLQVEQRDILLLVFLEKIPPRRLS
AHHRLARLVKTRTYLDWPQDPHQHQAFWDRLWAKLKPPTEA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatgttttccctgttcctgttgattcagagtgttagtggatggatgcatcct
aaatgccacgtttataacactggggaatactttcccacctggaactactgtcctttggca
gaacagtacactgctgcctgtcgagatgtcacagccatcgaggaggatctgcttggactt
ccctctaatatcaataccctctgcatatctatgaaacgtgggggaaatagttccatgtct
ctgggctttttcgctcgttttcagtatttggagtatctgttcattggaggctgttttcct
caaatccttccagctgggaatagccagggccttcaaaatctgcagcatatgcacattaat
ggattggtcactgggtgctgtgattgtcatattgggcctaacacattcagagatctagtc
aagctaagtaatttgaccatatttggttataggctatcagcaatggcaccagatgttttc
cattacatacctcaattacaaagtgtctatattcatgaaccctgtgtagagaatttgtca
gaaatactatgcagaatagttcatataatttcacttacaaagttaaatgtacatgcacca
aatatacaatcgttaaaccaatcaaactgctccatcttaaaagctaccgaaagcaatcta
acaagcgtcaatttagatttcggtcaaataaaccatatagaggaaggtgcactggcctgt
ctccagaacctgacacgtttttctgggggcctaaaccaggatgtcctactgcgccttccc
ctgtctggcattaagcaaatccaggtcttgtattcctatggtaggaatagcattgatttt
gaaagtatctgtaatgtagtgtttttgctttcaatcaaggaaatacattttgccaatgtc
aatacaagcagcctctccatgtctagtgttgaattgtgcatcgggctggaatatatgggt
tttgatggacctggacccttccattcttctccccatttgaaattgaattttatttccagt
ctcaaaaaccttaaaatgttatatgtatctggccagacagaaaacagtcttgacctctgc
tcattccgaaaacaaccaatcacatggttaacagaactcactttcatgtcgagcaatgta
caaacgctttttgcaaaacggttcagctgtcttgagaacctgcggtctctagatttgtca
tgtagtttcatttcaaacattgaagactttgctttcttcggattggcaaatctggagtcc
ttacacatgacacaaaatagtataacccagttatatgcaaacacgtttattggtttacat
agtttgacattgttagacctcagggaaaatccacagatctacaatattgaaacaatgtct
ttcgcaaaacttacgtgtctaagacaagtgtttctggggtacttgaactatccaccaaga
gaacccgtgataaagctgaatctgacacttgtattcggtgacgttctgagtcacctgact
catctgcacattagttcaggtattaggccaatgcagttgattattggcagtaacatcaca
tctaaacagaacctgagtctccaactcaaaggccagacagtgtcatttgaagactgtgac
agacccttctttcagtctgtaacccatcttcatgctgatgctgaagaattcctttgtgga
tctgaattcatgggaaagtacttcaggtctgtggagacatttgtgtacagatcaaagctt
tcagctaaaagtgtggacttaacatcaatgaatcagctcattcacctgaggaaactgact
ctagtacaggtggatcttttaatacagcgttctgccgacatcatttttcacaacctgacc
aaactggaggttctgaaactttcaaactgcaggattgactctttggaggggggtttaact
aaagactttaaatccttgaaaaccttatatttgcgtatcgagaacatttataatgtaatc
tacagctttactgaacatctctctagcctaaagtatttgatacttgatacattacagatg
ttttgcagttgtgacaatgcttggctcattgcatgggcaaaggggtacaggccggttgaa
gtgatcatgcttaatcacgaagttatgtataatttagaggacttgatatgcttgtcagac
aatggactagacacacctaactttgtcaagtacacagaagccaactgcacaacagaggtg
ggctttgtgctctttgctgcgactggcctgggagtcatcttcttcatgcttgtggtgctg
gtccataatctgaccggtccttacctcctccccctctactacatcatccttggctggctg
tcagaggcgatgcgatcaaacaccagggggcgctaccactacgatgcgtttgtctcctac
agcgggaaggacgagcgctggttggtggaggagctactacccaacctggagaagaggggt
ccccctttcctacgcctctgtctgcacagcagggacttccagctggggaaggacattgtg
gagaacatcacagacagcctctaccggagccgtcgcacactctgcctggtcagtcggcac
tacctgcacagtaactggtgctccctggagatgaagctggccacctccagactgcaggtg
gaacaaagggacatcctcctcctggtcttcctggagaagatcccccctcgcaggctgtct
gcccaccacaggctggctcgcctggtgaagaccaggacctatctggactggccccaggac
ccccatcagcaccaggcattctgggacagactgtgggctaaactgaaacctccaactgaa
gcctga
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