KEGG   Oncorhynchus tshawytscha (Chinook salmon): 121839773
Entry
121839773         CDS       T05605                                 
Name
(RefSeq) toll-like receptor 13
  KO
K18808  toll-like receptor 13
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:otw04054]
    121839773
Pattern recognition receptors [BR:otw04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   121839773
SSDB
Motif
Pfam: LRR_8 TIR TIR_2 LRR_4 LRR_5 LRR_9 LRR_EndoS
Other DBs
NCBI-GeneID: 121839773
NCBI-ProteinID: XP_042156135
LinkDB
Position
LG17:complement(13002867..13009045)
AA seq 941 aa
MRAMFSLFLLIQSVSGWMHPKCHVYNTGEYFPTWNYCPLAEQYTAACRDVTAIEEDLLGL
PSNINTLCISMKRGGNSSMSLGFFARFQYLEYLFIGGCFPQILPAGNSQGLQNLQHMHIN
GLVTGCCDCHIGPNTFRDLVKLSNLTIFGYRLSAMAPDVFHYIPQLQSVYIHEPCVENLS
EILCRIVHIISLTKLNVHAPNIQSLNQSNCSILKATESNLTSVNLDFGQINHIEEGALAC
LQNLTRFSGGLNQDVLLRLPLSGIKQIQVLYSYGRNSIDFESICNVVFLLSIKEIHFANV
NTSSLSMSSVELCIGLEYMGFDGPGPFHSSPHLKLNFISSLKNLKMLYVSGQTENSLDLC
SFRKQPITWLTELTFMSSNVQTLFAKRFSCLENLRSLDLSCSFISNIEDFAFFGLANLES
LHMTQNSITQLYANTFIGLHSLTLLDLRENPQIYNIETMSFAKLTCLRQVFLGYLNYPPR
EPVIKLNLTLVFGDVLSHLTHLHISSGIRPMQLIIGSNITSKQNLSLQLKGQTVSFEDCD
RPFFQSVTHLHADAEEFLCGSEFMGKYFRSVETFVYRSKLSAKSVDLTSMNQLIHLRKLT
LVQVDLLIQRSADIIFHNLTKLEVLKLSNCRIDSLEGGLTKDFKSLKTLYLRIENIYNVI
YSFTEHLSSLKYLILDTLQMFCSCDNAWLIAWAKGYRPVEVIMLNHEVMYNLEDLICLSD
NGLDTPNFVKYTEANCTTEVGFVLFAATGLGVIFFMLVVLVHNLTGPYLLPLYYIILGWL
SEAMRSNTRGRYHYDAFVSYSGKDERWLVEELLPNLEKRGPPFLRLCLHSRDFQLGKDIV
ENITDSLYRSRRTLCLVSRHYLHSNWCSLEMKLATSRLQVEQRDILLLVFLEKIPPRRLS
AHHRLARLVKTRTYLDWPQDPHQHQAFWDRLWAKLKPPTEA
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgagagccatgttttccctgttcctgttgattcagagtgttagtggatggatgcatcct
aaatgccacgtttataacactggggaatactttcccacctggaactactgtcctttggca
gaacagtacactgctgcctgtcgagatgtcacagccatcgaggaggatctgcttggactt
ccctctaatatcaataccctctgcatatctatgaaacgtgggggaaatagttccatgtct
ctgggctttttcgctcgttttcagtatttggagtatctgttcattggaggctgttttcct
caaatccttccagctgggaatagccagggccttcaaaatctgcagcatatgcacattaat
ggattggtcactgggtgctgtgattgtcatattgggcctaacacattcagagatctagtc
aagctaagtaatttgaccatatttggttataggctatcagcaatggcaccagatgttttc
cattacatacctcaattacaaagtgtctatattcatgaaccctgtgtagagaatttgtca
gaaatactatgcagaatagttcatataatttcacttacaaagttaaatgtacatgcacca
aatatacaatcgttaaaccaatcaaactgctccatcttaaaagctaccgaaagcaatcta
acaagcgtcaatttagatttcggtcaaataaaccatatagaggaaggtgcactggcctgt
ctccagaacctgacacgtttttctgggggcctaaaccaggatgtcctactgcgccttccc
ctgtctggcattaagcaaatccaggtcttgtattcctatggtaggaatagcattgatttt
gaaagtatctgtaatgtagtgtttttgctttcaatcaaggaaatacattttgccaatgtc
aatacaagcagcctctccatgtctagtgttgaattgtgcatcgggctggaatatatgggt
tttgatggacctggacccttccattcttctccccatttgaaattgaattttatttccagt
ctcaaaaaccttaaaatgttatatgtatctggccagacagaaaacagtcttgacctctgc
tcattccgaaaacaaccaatcacatggttaacagaactcactttcatgtcgagcaatgta
caaacgctttttgcaaaacggttcagctgtcttgagaacctgcggtctctagatttgtca
tgtagtttcatttcaaacattgaagactttgctttcttcggattggcaaatctggagtcc
ttacacatgacacaaaatagtataacccagttatatgcaaacacgtttattggtttacat
agtttgacattgttagacctcagggaaaatccacagatctacaatattgaaacaatgtct
ttcgcaaaacttacgtgtctaagacaagtgtttctggggtacttgaactatccaccaaga
gaacccgtgataaagctgaatctgacacttgtattcggtgacgttctgagtcacctgact
catctgcacattagttcaggtattaggccaatgcagttgattattggcagtaacatcaca
tctaaacagaacctgagtctccaactcaaaggccagacagtgtcatttgaagactgtgac
agacccttctttcagtctgtaacccatcttcatgctgatgctgaagaattcctttgtgga
tctgaattcatgggaaagtacttcaggtctgtggagacatttgtgtacagatcaaagctt
tcagctaaaagtgtggacttaacatcaatgaatcagctcattcacctgaggaaactgact
ctagtacaggtggatcttttaatacagcgttctgccgacatcatttttcacaacctgacc
aaactggaggttctgaaactttcaaactgcaggattgactctttggaggggggtttaact
aaagactttaaatccttgaaaaccttatatttgcgtatcgagaacatttataatgtaatc
tacagctttactgaacatctctctagcctaaagtatttgatacttgatacattacagatg
ttttgcagttgtgacaatgcttggctcattgcatgggcaaaggggtacaggccggttgaa
gtgatcatgcttaatcacgaagttatgtataatttagaggacttgatatgcttgtcagac
aatggactagacacacctaactttgtcaagtacacagaagccaactgcacaacagaggtg
ggctttgtgctctttgctgcgactggcctgggagtcatcttcttcatgcttgtggtgctg
gtccataatctgaccggtccttacctcctccccctctactacatcatccttggctggctg
tcagaggcgatgcgatcaaacaccagggggcgctaccactacgatgcgtttgtctcctac
agcgggaaggacgagcgctggttggtggaggagctactacccaacctggagaagaggggt
ccccctttcctacgcctctgtctgcacagcagggacttccagctggggaaggacattgtg
gagaacatcacagacagcctctaccggagccgtcgcacactctgcctggtcagtcggcac
tacctgcacagtaactggtgctccctggagatgaagctggccacctccagactgcaggtg
gaacaaagggacatcctcctcctggtcttcctggagaagatcccccctcgcaggctgtct
gcccaccacaggctggctcgcctggtgaagaccaggacctatctggactggccccaggac
ccccatcagcaccaggcattctgggacagactgtgggctaaactgaaacctccaactgaa
gcctga

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