Oncorhynchus tshawytscha (Chinook salmon): 121840036
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Entry
121840036 CDS
T05605
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 2-like
KO
K20055
amyloid beta A4 precursor protein-binding family A member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
121840036
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
121840036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
NRho
Motif
Other DBs
NCBI-GeneID:
121840036
NCBI-ProteinID:
XP_042157123
LinkDB
All DBs
Position
LG19:complement(55142705..55157755)
Genome browser
AA seq
868 aa
AA seq
DB search
MKVYMSSSSSSETQDCREAAVRPRPPRPRPRPRSGPCPSTPHPHQTQSHTQQAKARPKQA
YQTHTYLTEVHTLPKQAYQTHTYLTEVDPLPKQVQNNQLQAQSDVRQHQQTQNCRESAIR
PTHRSSPNTPHPQPPQTPAQMQHIQAHQIQAQYRQAPPTQAQMHKRQAPTHPTHAQTNKR
QAPAHPTQAQTKQHHKESPVSPSHSPRPTSDSPRPISDSPRPISDSPRPISDSPRPISDS
PRPTSDNPRPTSDSPRPTSDSPRPISDSPRPTSDGPRPISNSPRPTSDSPWPIFDSPRPT
SDSPRPTSDSPRPISDSPRPTSDNHRPTSDSPRPTSDSPRPISDNPRPISDNPRPAPPPS
HNAQTQEHTPNTRQTEQHCRETTTSWSAKPPSPLLQESHQTQTYQPRKDSTTSPSPRPTS
DSSSSLDKHPRAVKLSTSPAPPSSHHNTEPQREYPEERQTRTQTHKQMPHNIAEQRPGRP
HCPEPRALQEDSNNTPQPEPTQNNASFPSFVDVPGPCEPEDLIDGIIFAANYLGSTQLLS
NKNPSKGTRMAQAQEAVSQVKSQDGDSQTVTEVDLFISTKAVKVLNADSQETLMDRTSSQ
DCSEADLSCSEGPRRYRMICYVFESEDAQLIAQSIGQAFSVAYREFLRANGINPKDLSQK
QYSDIINSQEMYNDDLVHFSNSDNCKELELEKQKGESLGVVIVESGWGSILPTVILANML
NSGPAARSGKLSVGDQIMSINNTSLVGLPLATCQGIIKGLKSQVQVKLSIVSCPPVTTVL
IKRPDLKFQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVAMPHEKIVQTLS
VSVGEINMKTMPAVMFRLLTGQEIPVYI
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtatacatgagtagcagcagcagctcagagacacaggactgcagagaggctgcc
gtcaggcccagaccaccaaggcccaggcccaggcctagatccgggccctgccccagcacc
ccacaccctcaccagacacaatcccacactcagcaggccaaggcccgcccgaaacaagcc
taccagacccacacctacctgacagaggtccataccctcccaaaacaggcctaccagacc
cacacctacctgacagaggtcgatcccctcccgaaacaggtccagaacaaccagctacag
gcccagagcgacgtccgacaacaccagcagacacagaactgtagagaaagtgctatcagg
cctacacacagatctagccccaacacaccacaccctcaacccccccagaccccggcccaa
atgcagcacatccaggcccaccaaatccaggcccagtatagacaggccccgccgacacag
gcccagatgcataagagacaagcacccacccacccgacacatgcccagaccaacaagaga
caagcacccgcccacccaacacaggcccagaccaagcagcaccacaaagagagtcccgtc
agtcccagccacagccctaggcccacctctgacagccctaggcccatctctgacagccct
aggcccatctctgacagccctaggcccatctctgacagccctaggcccatctctgacagc
cctaggcccacctctgacaaccctaggcccacctctgacagtcctagacccacctctgac
agccctaggcccatctctgacagccctaggcccacctctgacggccctaggcccatctct
aacagccctaggcccacctctgacagcccttggcccatctttgacagccctaggcccacc
tctgacagccctaggcccacctctgacagccctaggcccatctctgacagccctaggccc
acctctgacaaccataggcccacctctgacagtcctaggcccacctctgacagtcctagg
cccatctctgacaaccctaggcccatctctgacaaccctaggcctgccccacctcccagc
cacaatgcccagacacaggaacacactcccaacacccgacagaccgagcagcattgcaga
gagaccaccaccagttggagcgccaagcctccgtctcctctcctccaggagagccaccag
acccagacctatcagcctcgcaaagacagcaccaccagccccagcccaaggcccacttct
gactcctcatccagcctggacaaacatcccagggctgtaaaactatcaacatcaccagct
ccaccatcttcacaccacaacacagagccacagagggagtaccccgaggagagacagaca
cggacacagacacacaaacagatgccccacaacatcgcagagcagcggcctggcaggccc
cactgtccagagccccgggccctacaggaggacagtaacaacacacctcagcctgaacca
acacagaacaacgcctcgttccccagcttcgtggatgtcccaggtccgtgtgagcccgag
gacctgattgatggcatcatctttgctgctaactacctgggttccacacagctgctgtct
aacaagaacccatctaaaggaacacgcatggcccaggcgcaggaggctgtcagccaggtc
aagagccaagatggagactctcagacggtgacagaagtggacctcttcatctccaccaag
gctgtcaaagtgctgaatgccgactcccaggagacgctgatggacagaacatcctcgcag
gactgtagtgaagctgatctctcctgctcagagggaccgagacggtacagaatgatctgc
tacgtcttcgagtcagaggacgcccagctcattgcccagtccatcggccaggcgttcagc
gttgcctacagggagttcctccgtgccaacgggatcaaccctaaggacctgagtcagaag
caatacagtgacatcatcaattcccaggaaatgtacaatgacgacctggtccatttctca
aactctgacaactgtaaagagctggagttggagaagcagaagggagagagcctaggtgtg
gtgatagtggagtctggctggggctccatcctgccaacagttatcctagctaacatgttg
aacagcggcccggctgcccgctctgggaaactcagcgtcggggaccagatcatgtccatt
aacaacaccagcctggtgggcctgccgttagctacctgccaaggcatcatcaagggtctg
aagagccaggtgcaggtgaagctgagcatcgtgagttgtcctcctgtcaccaccgtcctc
atcaagagacccgacctcaagttccagctgggctttagtgttcagaacggcatcatctgc
agtctgatgcgtggaggtatcgcggagcgaggaggggtgcgagtcggccacaggatcatt
gagatcaatgggcaaagtgtggttgccatgccgcatgagaagatagtccagaccctgtct
gtgtcagtgggagagatcaacatgaagaccatgcctgcagtgatgttcagactgttaaca
gggcaggagattcccgtctacatttag
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