Oncorhynchus tshawytscha (Chinook salmon): 121840394
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Entry
121840394 CDS
T05605
Name
(RefSeq) FAS-associated factor 2
KO
K18726
FAS-associated factor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
121840394
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121840394
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAF1
UBA_8
UBX
UBA_4
Thioredoxin_7
DUF3752
Motif
Other DBs
NCBI-GeneID:
121840394
NCBI-ProteinID:
XP_042159481
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Position
LG21:42591732..42603211
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AA seq
417 aa
AA seq
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MDQCRRTLEQHNWNIEAAVQDRLNEQEGVPSVFNPPPSRPLQVNTADHRVYSYIVSRPQP
RGLIGWSYYMIMLPFRLTYYTLLDIFRFALRWVRPDPRGRVTDPVGDVVSFIHSFEEKYG
RSHPVFYQGTYSQALNDAKRELRYLLVYLHGEDHQDTDQFCRSTLCTEEVLTFLNTRMLF
WACSTSRPEGYRVSQALRENTYPFLAMIMLKDRKMTVVGRLEGLIQSEDLLNQLTFIMEA
NQTYLMSERLEREERNQTQVLRAQQDEAYLESLRADQEKDRRKREEQEKVQAEEEKVRQT
VLAEERRRRTLEEEKELKSECLPPEPPADDPDSVKIVFKLPNDTRVERRFLFQESLTVIY
DFLFSLKETPEKFQIVTNFPRRVLPCLPTEEQPNPPSLKEAGLSRSEVLFVQDLTED
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatgtcgtcgtacattagaacaacacaattggaacatcgaggctgcagtgcag
gacagactgaacgagcaggaaggagttcccagtgtgtttaaccctccgccctccagaccc
ttacaggtcaacacagcagaccacagagtgtatagctatatcgtctccaggccacaaccc
agaggattaataggatggagttactacatgataatgctacctttcagattgacatattac
acacttctggacatattcaggtttgccctgcggtgggtcaggccagaccctcgtggacgc
gtcacagaccctgtgggtgacgtggtctccttcatccatagttttgaagagaagtacggt
cgatcgcatccagtgttttaccagggaacatatagccaggcattgaacgatgccaaacgt
gagcttcgctacttgttagtttacctccatggagaggaccaccaggatacagaccagttc
tgtcgctccacgttatgtacagaagaggtcctgaccttcctcaacaccaggatgctgttc
tgggcctgttccaccagcaggcctgagggatacagagtgtcccaggcgttgcgtgagaac
acttacccgttcctggccatgatcatgttgaaggaccgtaagatgacggtggtgggacgt
ctggaggggctcatccaatcagaggacctcctcaaccagctcaccttcatcatggaggcc
aaccagacctacctgatgtctgaacgcttggaacgggaggagaggaaccagacgcaggtg
ttgcgggcgcagcaggacgaggcctacctggagtcgctcagagccgatcaggagaaggac
cgaaggaagagggaggagcaggagaaggtccaggcggaggaggagaaggtccggcagacc
gttttggccgaggagaggaggaggaggacgttggaggaagagaaggagcttaagtcagaa
tgtcttccccccgaacccccagcagacgaccctgacagcgtcaagatagttttcaaactg
cctaatgacaccagagtggagaggcggttcctcttccaggagtccctgacggtaatatac
gacttcctgttctcattgaaggagaccccggagaaattccagatagttaccaacttcccc
cgccgggtcctgccctgccttcccacggaggagcagcccaacccccccagcctcaaagag
gccggcctcagccgttctgaggtcctctttgttcaggacctcacagaagattga
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