Oncorhynchus tshawytscha (Chinook salmon): 121840635
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Entry
121840635 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: KH homology domain-containing protein 4-like
KO
K25780
kelch domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
121840635
Spliceosome [BR:
otw03041
]
Complex B
Other components
Prp19-related factors
121840635
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GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Motif
Other DBs
NCBI-GeneID:
121840635
NCBI-ProteinID:
XP_042161010
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Position
LG23:26831920..26845257
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AA seq
599 aa
AA seq
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MSFGGTQNGGRRSKWDQPGPGPGSDQMGEAEAAPTGALDAAAAVAAKINAMLVAKGKLKP
SQIGPSGPSGPPDKVVGAGKPQPPMKAKDDLVVAEVEINDVPLPCRNLLTRGQTQDEISK
VSGAAVSTRGRYMAAVEKYKAPQGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAAT
SYSGTGATVPVYQQHKPQPPSLPPINHHHRPHFQSGMHYVQEKLFVGLEHAIQGFSVKER
VEGPGSSYLQHIQGETGAKVFLRGKGSGCLEPASGREAFEPMYIYISHPKPEGLAAAKTL
CDNLLQTVHAEYSVFLNQMSVMMPTPGFMQPPMANGMPPSXPLLPPSGYQPSYPLPVPPP
QPIPPPYAVPLPFPLGCPPVSPSQPVRPPPAPVTLPQTLPPSPFPPAAPVLPKAPPPVVS
ANPPQKRRFTEEVPDERDSGLLGYQHGPIHMTNLGAGFPVGSPGPEASGPPPPSSSGPPR
ERDSRQLMPPPCLPSLSPSFLPLSPTVFPSLSCLSDPSVKRMKTGLVAYAGDSSDEEEDH
STPKTFGAGNHGNVAGATHSTPTSPPGWTLGYRCPPPPPQRAKTQQAQSQQPMPFWMAP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggtggaacgcaaaacggcggtcgccgtagtaaatgggaccagcctggccca
ggtcctggttcagaccagatgggggaggcggaggcagctcctacaggggctctggacgct
gcagctgctgtggcagctaagatcaacgccatgctggtagccaagggcaagctcaagccc
tcccagataggaccctctggaccatctggacccccagacaaggttgtgggtgcagggaag
ccccagcctcctatgaaagcgaaggatgacctggtggtggcggaggtggagatcaacgac
gttcctctcccctgccggaacctgctgacccgcggacagacacaggacgagatcagcaaa
gtgagcggtgctgctgtgtccaccagggggcgatacatggcagcagtggagaagtacaag
gctccacaaggggaccgacccctctatcttcacgtccagggccagaccagggagcttgtc
gacagagctgtgaaccgcatcaaggagatcatcactaacggagtggtgaaggcggccacc
tcctacagcggaaccggagccacagtcccagtctaccagcaacacaaaccccagcccccc
tcactgccccccatcaaccaccatcacagaccacactttcagtctgggatgcactatgtg
caggaaaagttgtttgttggtctggagcatgccatccagggcttctcagtgaaggagagg
gtggaagggccaggcagctcctacctgcagcacatccagggtgagactggggccaaggtc
ttcctcaggggaaagggatcaggctgtctggagcctgcctctgggcgagaggccttcgaa
ccgatgtacatctacatcagtcatcccaaaccagagggccttgctgcagctaagaccctg
tgtgacaacctgctgcagacggttcatgcagagtattctgtcttcctcaaccagatgagt
gtcatgatgcctactcccggctttatgcagccccccatggccaacgggatgccccccagc
nnccccttactacccccatcggggtaccagcccagctaccccctccctgtacctccccct
cagcccattcctcccccctacgctgtccccctcccattccccctgggctgcccgccggtc
tccccctcccaaccggtacgccctccccctgcacctgtcactttaccacagactctccca
ccttctcctttcccacccgctgctccggttctgcccaaagctccgcctcctgtagtctca
gccaatccgccgcagaaaagacgcttcactgaggaggtgccagacgagagggacagcggt
ctgctgggataccagcatggacccattcatatgactaatttaggtgcaggcttccctgtg
ggcagccccggcccagaagcttcaggacccccgccaccgagttcctccgggccgccgagg
gagagggacagtaggcagctgatgcctccaccgtgtcttccctctctctctccctcattc
ctccctctttctcccactgtttttccctctctctcatgtctctcagatccctcagtgaag
aggatgaagacggggcttgtggcgtacgctggtgactcctcggacgaagaggaggaccac
tccacccccaaaacctttggggcaggtaaccatggtaacgtcgctggggcgacccactcc
acccccacctcaccccctggctggactctggggtaccgctgcccccctccgcctccccaa
cgtgccaaaacacagcaggcacagtcacagcagcccatgcccttctggatggccccataa
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